Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30234g00014 ATGGTAGACAGTGGTGGTGCTGCTGCACCTGATTCTGACCTCACTACTTTCGACACTGCTAATTGCACGCAACGAAGCTCCATCAGCACCCAAAGCAACTGTAGCACCAGCTTCAGCCGTCTCTCCTTCGACCTCCTCCCTCCATCTTCACCGGAAAGTATTTCCCTCAAGCCTCACCGCTCCTCTGACTTTGCCTATTCCGCTATCCTCCGCCGCAAGACCGCCCTCACCTTCCACGACTTCTGCCTCATCCGCCGCATCGGCGCCGGAGATATCGGCACCGTCTACCTCTGCCGCCTCCGCAACGACGACAACGAAAACGCAGAAGAAAAACTTAATCCAAGCTGCCTTTACGCTATGAAGGTGGTGGACAAAAACGCCGTGGCTTTAAAGAAAAAATCACAGAGAGCCGAAATGGAGAGAAGGATCCTGAAGATGCTGGACCACCCTTTCCTCCCTACGCTGTACGCGGAGTTCGAAGCGTCACACTTCTCTTGCATCGTGATGGAGTTTTGCTCCGGTGGAGACTTGCACTCCCTCCGCCACAAGTTCCCTCACAATCGTTTTCCCTTAACCTCCGCAAGGTTTTATGCTGCTGAAGTGTTGGTGGCATTAGAGTACCTTCACATGCTGGGAATCATCTACAGGGATCTCAAACCCGAGAACGTGTTAGTCAGATCAGACGGTCACATCATGCTCTCCGATTTCGATCTTTCTCTCTGCTCAGATGCAATCCCAGCCGTTCAATCCTCTGATTCCTTCCACGATACTTCCTTCCCATCATCCACATTGCAATACTCTCGGACACTCTCTACCCCCTTCTCCTGCTTCCCCAACCGGGTCTTCCGCTCACGTAAAGTCCAAACCCTTCAACCGAACCGGCTCTTCGTGGCCGAACCGGTCTCGGCTCGCTCATGCTCTTTCGTTGGCACACACGAGTACGTGTCTCCGGAGGTAGCAGCCGGTGGATCACACGGAAATGCAGTTGACTGGTGGTCATTCGGGGTATTCATATACGAGCTAATATACGGTCGTACGCCGTATGCGGCTCAATCCAACGAAGCTACACTGCGAAACATCATAAAGAAGCCGCTGAGGTTCCCCACGGCCACGCCCTCTAGCGCGCTTGAACAACACGCGCGGAACTTGATCTCCGGTTTGCTTCACAAGGACCCTGGTCAGCGACTGGGTTCGAAGCGGGGCGCTGCTGACGTCAAGAAGCATCCGTTTTTCAAAGGGCTCAACATGGCGCTGATTCGCATGTTGACGCCACCACAAGTCCCTGGTTTGAAACGTCCCAAAACGACGTCGTGGCGCACAAACGATGATAGTAATAATCATCTTATCACCAACAGTAGTAACAGACAGTATTCTATGGCGTCCTTTGACTATTTCTTTTGA 1401 0.5268 MVDSGGAAAPDSDLTTFDTANCTQRSSISTQSNCSTSFSRLSFDLLPPSSPESISLKPHRSSDFAYSAILRRKTALTFHDFCLIRRIGAGDIGTVYLCRLRNDDNENAEEKLNPSCLYAMKVVDKNAVALKKKSQRAEMERRILKMLDHPFLPTLYAEFEASHFSCIVMEFCSGGDLHSLRHKFPHNRFPLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSDAIPAVQSSDSFHDTSFPSSTLQYSRTLSTPFSCFPNRVFRSRKVQTLQPNRLFVAEPVSARSCSFVGTHEYVSPEVAAGGSHGNAVDWWSFGVFIYELIYGRTPYAAQSNEATLRNIIKKPLRFPTATPSSALEQHARNLISGLLHKDPGQRLGSKRGAADVKKHPFFKGLNMALIRMLTPPQVPGLKRPKTTSWRTNDDSNNHLITNSSNRQYSMASFDYFF 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30234g00014 466 PANTHER FLIPPASE KINASE 1-RELATED 25 433 - -
Stsc30234g00014 466 MobiDBLite consensus disorder prediction 433 450 - -
Stsc30234g00014 466 Pfam Protein kinase domain 84 239 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30234g00014 466 Pfam Protein kinase domain 305 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30234g00014 466 SUPERFAMILY Protein kinase-like (PK-like) 58 444 IPR011009 -
Stsc30234g00014 466 SMART serkin_6 81 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30234g00014 466 Gene3D Transferase(Phosphotransferase) domain 1 176 429 - -
Stsc30234g00014 466 ProSiteProfiles Protein kinase domain profile. 81 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30234g00014 466 MobiDBLite consensus disorder prediction 429 450 - -
Stsc30234g00014 466 Gene3D Phosphorylase Kinase; domain 1 81 437 - -
Stsc30234g00014 466 ProSitePatterns Serine/Threonine protein kinases active-site signature. 213 225 IPR008271 GO:0004672|GO:0006468
Stsc30234g00014 466 FunFam protein kinase PINOID 2 79 171 - -
Stsc30234g00014 466 FunFam protein kinase PINOID 172 240 - -
Stsc30234g00014 466 FunFam serine/threonine-protein kinase D6PK-like 303 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30234g00014 Stsc-Chr30234 89354 91262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30234g00014 23 465 AGC Kinase Gene Family AT2G34650 65.924 0.0 580
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Stsc30234g00014 Pkinase 3.1e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30234g00014 - - gmx:100795536 667.151