Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30234g00003 ATGGGGAACATTTATTGGATACACGTGGGGATGTTGTGTTTCTATGGAATGCTTATACTGCCTTCCTTTTGTCAAGTTGGTTCAGGTGATGCACCTACTGCTGTCTACATTGTTACTCTGAGACAAGCTCCCACTTCTCATTATTATCAGGATGAGTTGGAAAGAAGGGGTCACAGCTACCGACATGGTTCTTCTTTGAGAAGAAATAGACTCCAAAGAACAAGACATCGAAATGTTACGAAGCCAGTTAGGAGCCACATTTATTACATTTCCCAAGCTCACGATTCACTTTTGAAGAAAGTGTTAAGAGGAGAGAAATATCTGAAGCTCTATAGCTATCATTACTTGATTAATGGATTTGCTGTGTTGGTCACCCCACAGCAGGCAGAGAAGCTATCAAAGAGAAGAGAAGTGTCCAATGTGGTTTTGGACTTCTCTGTCAGAACTGCAACCACCCATACTCCACAATTTTTGGGTGGATTTGAAACTGCTGGAGAAGGAATCACTATTGGTTTTATTGATACTGGCATTGATCCTACACACCCCAGTTTTGCTGATGATAAATCTGAACATCCGTACCCTGTTCCTGCAAAATTCTCTGGCATCTGTGAGGTTACACAGGATTTTCCATCTGGTTCTTGCAATAGGAAGCTCATTGCAGCCCGTCATTTCGCAGCATCTGCTATAACCAGAGGAATATTTAATTCAAGTGAGGACTATGCTTCTCCATTTGATGGAGATGGCCATGGCACGCACACAGCATCCATTTCAGCAGGAAACTATGGGATTCCAGTGGTTGTTGCTGGATATCATTTTGGAAATGCTAGTGGGATGGCTCCCCGTTCACACATTGCTGTCTACAAGGCATTATACAAGAGGTTTGGTGGATTTGCTGCAGATGTTGTTGCAGCTATTGACCAGGCAGCTCAAGACATGGTTGACATAATATGCTTGTCAATCACTCCAAATAGGCGCCCTCCTGGTATTGCAACTTTCTTCAATCCAATAGACATGTCATTGCTATCAGCTGTAAAAGCTGGTATTTTTGTGGTGCAAGCTGCTGGCAATACTGGACCATCACCTATGAGCATGTCCTCTTTCGGTCCATGGATCTTTACTGTTGGAGCAGCTTCTCATGATCGACTTTATAGCAATTCCATAATTCTTGGAAATAACATGACCATACCTGGAGTTGGACTGGCACCTGGCACACCTGAAAACATAATGTATAAACTGGTTCATGCGCATCATGCTTTGAACAATGACACAACAGTTAAGGATGATATGTATGTCGGTGAGTGTCAAGATGCAAGTAAGTTCAATCAGGATTTGGTGCAGGGAAACATCCTGATATGTAGCTATACGATCCGATTTGTGGTTGGGCTATCCACCATCGAGAATGCCTTAGAAACGGCCAAGAATCTTAGTGCAATTGGTCTTGTTCTCTGCATGGATCCTCTTGTGACTAGTTTTCAGCTTAACCCAGTTCCAATGAAAATGGCTGGCATAATTATTGCGTCTGCAAATGATTCCAAGGACTAA 1542 0.428 MGNIYWIHVGMLCFYGMLILPSFCQVGSGDAPTAVYIVTLRQAPTSHYYQDELERRGHSYRHGSSLRRNRLQRTRHRNVTKPVRSHIYYISQAHDSLLKKVLRGEKYLKLYSYHYLINGFAVLVTPQQAEKLSKRREVSNVVLDFSVRTATTHTPQFLGGFETAGEGITIGFIDTGIDPTHPSFADDKSEHPYPVPAKFSGICEVTQDFPSGSCNRKLIAARHFAASAITRGIFNSSEDYASPFDGDGHGTHTASISAGNYGIPVVVAGYHFGNASGMAPRSHIAVYKALYKRFGGFAADVVAAIDQAAQDMVDIICLSITPNRRPPGIATFFNPIDMSLLSAVKAGIFVVQAAGNTGPSPMSMSSFGPWIFTVGAASHDRLYSNSIILGNNMTIPGVGLAPGTPENIMYKLVHAHHALNNDTTVKDDMYVGECQDASKFNQDLVQGNILICSYTIRFVVGLSTIENALETAKNLSAIGLVLCMDPLVTSFQLNPVPMKMAGIIIASANDSKD 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30234g00003 513 CDD PA_subtilisin_like 386 505 - -
Stsc30234g00003 513 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 170 181 IPR023827 -
Stsc30234g00003 513 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 100 486 IPR045051 -
Stsc30234g00003 513 PRINTS Subtilisin serine protease family (S8) signature 165 184 IPR015500 -
Stsc30234g00003 513 PRINTS Subtilisin serine protease family (S8) signature 245 258 IPR015500 -
Stsc30234g00003 513 ProSiteProfiles Serine proteases, subtilase domain profile. 144 513 - -
Stsc30234g00003 513 Gene3D - 380 458 - -
Stsc30234g00003 513 Pfam Subtilase family 165 382 IPR000209 GO:0006508|GO:0008236
Stsc30234g00003 513 Gene3D Peptidase S8/S53 domain 167 379 IPR036852 GO:0004252|GO:0006508
Stsc30234g00003 513 Pfam Peptidase inhibitor I9 35 150 IPR010259 -
Stsc30234g00003 513 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 23 148 IPR037045 -
Stsc30234g00003 513 CDD Peptidases_S8_3 150 408 IPR034197 -
Stsc30234g00003 513 SUPERFAMILY Subtilisin-like 151 418 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30234g00003 Stsc-Chr30234 26621 30374 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30234g00003 1 512 Subtilisin-like Serine Gene Family AT4G20430 66.105 0.0 694
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30234g00003 - - gmx:100814065 786.949