Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30234g00002 ATGGATTATTTCATGCAATCCTTATTGCTAATTATGATCACCTTATTAGTTATATCCATCTTTGTTCTTAATAAAAAATATCAAGGTGGCACCAAAACCCTGCCCCCAGGTACTTTTGGATGGCCTATAGTGAATGAAACCTACCAATTTCTGTTCAAAAAAATTGATCATTTCCTTCAAGAAAAACACAAAAAGCACTCCTCAGAAATCTTCATGACCAAGTTACTAGGAGAACCAACAGTTGTTCTTTCTGGTCCTAATGCAAACAAATTTGTCTCCACCAATGAACCAAAACATGTCAAAGTTTGGTACTTGAAAACACAAAGAATGCTCTTCAATCTTCCTGATCCTGGTTATCAGCCGAAAAAAGCGGCAAAACAAGATTCCGTTGTAGCCGCAGCTCCGGTGAAGATCTTAGGGTTCTTGAAACCAGAAGGCCTAGTTAGGTACATGGGGTGCAACATTGAGTCCATCATGCACCAACACTTCATGGAAAATTGGGAAGGAAAAACAGAACTAAAGGTTTATCCTTTGGTGAAAAATTTTGCTCTTTCACTAGCCTTTCAGTTCTACTTAGGAATTGATGATCCACTCCATGTTGCAAAATTCGCAAGCAAGTTTGATGATTTGTATTCCGGGATTTATGCCGTTCCGGCGAATATTCCGGGGACTACATTTCACAGGGCAATGAAGGCTGCAAATGAAATCAGAGAAGAGATTCAATTATTGATCAAGAAGAAGATTGAAGATTTATCAAAGGGGATTGTTATGAATGATTTACTAGCACATATAGTTGGTGCTGTTGAGGATGGAAAATATGTGCCAAAAATTGAAATAAGTAACATCATAATGGGATTGATGAATTCTAGCTACACACCAATAGCAATCACACTTGCTTTCATGATCAGACACATTGGATTGGGGCCTCATATCTACCAAAAAATTGTATCTGAGCATGCTGAAATTAGAGAATCAAAAGGAGCAGATGCAACACTAGATTGGGAAAGCATACAAAAAATGAAATACACATGGTGTGTTGCACAAGAAACCATGAGACTGTACCCAACTGCACCTGGAGCATTCAGAGAGGCAGTCACAGATATCACCTTTGAGGGCTTTAATATTCCAAAGGGCTGGAAGATATTTTGGGCAATGATGGGAACCAATAAGAATGAGAAATACTTTGATGAAGCTGAAAGTTTTGATCCGTCAAGATTTGAAGAGAATGTTCCTGGTCCGTACAGTTTTATACCATTTGGTGGTGGAGCAAGGTCATGCCCTGGAAAAGATTACACAAGGTTTGTGATTCTCACTTTCATTCACAATCTCATAACCAAATTCAGTTGGCAAGTTATGCTTCCTCATGAGCAAGTCTTAGGCTCTTTGGTGCCTGTTCCAGCACAAGGAATTCCCATCCGAATTCGTCCCCTCTAA 1434 0.3919 MDYFMQSLLLIMITLLVISIFVLNKKYQGGTKTLPPGTFGWPIVNETYQFLFKKIDHFLQEKHKKHSSEIFMTKLLGEPTVVLSGPNANKFVSTNEPKHVKVWYLKTQRMLFNLPDPGYQPKKAAKQDSVVAAAPVKILGFLKPEGLVRYMGCNIESIMHQHFMENWEGKTELKVYPLVKNFALSLAFQFYLGIDDPLHVAKFASKFDDLYSGIYAVPANIPGTTFHRAMKAANEIREEIQLLIKKKIEDLSKGIVMNDLLAHIVGAVEDGKYVPKIEISNIIMGLMNSSYTPIAITLAFMIRHIGLGPHIYQKIVSEHAEIRESKGADATLDWESIQKMKYTWCVAQETMRLYPTAPGAFREAVTDITFEGFNIPKGWKIFWAMMGTNKNEKYFDEAESFDPSRFEENVPGPYSFIPFGGGARSCPGKDYTRFVILTFIHNLITKFSWQVMLPHEQVLGSLVPVPAQGIPIRIRPL 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30234g00002 477 PANTHER CYTOCHROME P450 26 32 454 - -
Stsc30234g00002 477 PRINTS E-class P450 group I signature 384 408 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30234g00002 477 PRINTS E-class P450 group I signature 416 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30234g00002 477 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30234g00002 477 PRINTS E-class P450 group I signature 426 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30234g00002 477 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 419 428 IPR017972 GO:0005506|GO:0016705
Stsc30234g00002 477 Pfam Cytochrome P450 220 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30234g00002 477 SUPERFAMILY Cytochrome P450 33 476 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30234g00002 477 CDD CYP90-like 64 476 - -
Stsc30234g00002 477 Gene3D Cytochrome P450 24 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30234g00002 Stsc-Chr30234 11616 13733 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30234g00002 33 381 Cytochrome P450 AT5G36110 32.682 7.65e-66 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30234g00002 K20667 - tpra:123917065 694.501