Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30233g00028 ATGGACATCGATGATGATTTCACATTTTATCAGGTTAGTTCACAGGATGGTGTTGAAACAAAGAAACTTGCTTCAGAGATTGCTGATATTTCCATAAAAGAAGAATCTTCAGGCACTCCTACTACTAGTAGTAATCAAGATGGGGGTTTCTTGTGGAAGGATGGTTTGGCGAACAATTCAGACTCTAGAAAAGAGGAAAAGGTTGGTTCTTTGTCTTTCAGCGTAACCAGTGCGACTTCGCGTCAGCCGAGTGAATTGAACCAGAAATCAGTTCTGAATGATGCGAAGAATTCGATTCAGAAGTCTCCAGAACTGAAGAGTCCTGTTGCAAAGCCGGCAGCTCGGGCGAAAGTTCCTTTCGAAAAAGGATATAGTCAAATGGATTGGCTTAAGCTTACTCGGACGCATCCTGACCTTGCAGGCTTAAAGGGACAATCAAATAAGAGACTTATTCCAATGGATGAAGTTAGAAAGCACCAATCAGAAGGTGAAATGTGGACTGTTTTAAAAGGACATGTCTACAATATATCACCATATATGAAGTTTCACCCTGGAGGTGTGGATATGTTGATGAAGGCAGTGGGAAAAGATTGCACATCTCTCTTCAATAAATACCATGCTTGGGTTAATGCCGAATTCTTATTGGAGAAATGCCTTGTGGGCACCTTAGATGAAAGTCATTAA 684 0.4108 MDIDDDFTFYQVSSQDGVETKKLASEIADISIKEESSGTPTTSSNQDGGFLWKDGLANNSDSRKEEKVGSLSFSVTSATSRQPSELNQKSVLNDAKNSIQKSPELKSPVAKPAARAKVPFEKGYSQMDWLKLTRTHPDLAGLKGQSNKRLIPMDEVRKHQSEGEMWTVLKGHVYNISPYMKFHPGGVDMLMKAVGKDCTSLFNKYHAWVNAEFLLEKCLVGTLDESH 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30233g00028 227 MobiDBLite consensus disorder prediction 69 90 - -
Stsc30233g00028 227 Pfam Cytochrome b5-like Heme/Steroid binding domain 154 223 IPR001199 -
Stsc30233g00028 227 FunFam Cytochrome b5 reductase 4 146 227 - -
Stsc30233g00028 227 PRINTS Cytochrome B5 signature 183 197 IPR001199 -
Stsc30233g00028 227 PRINTS Cytochrome B5 signature 173 183 IPR001199 -
Stsc30233g00028 227 PRINTS Cytochrome B5 signature 211 223 IPR001199 -
Stsc30233g00028 227 PANTHER CYTOCHROME B5 REDUCTASE 4 FAMILY MEMBER 1 226 - -
Stsc30233g00028 227 MobiDBLite consensus disorder prediction 32 49 - -
Stsc30233g00028 227 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 179 186 IPR018506 GO:0020037
Stsc30233g00028 227 MobiDBLite consensus disorder prediction 31 90 - -
Stsc30233g00028 227 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 148 224 IPR001199 -
Stsc30233g00028 227 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 148 226 IPR036400 -
Stsc30233g00028 227 Gene3D - 145 227 IPR036400 -
Stsc30233g00028 227 SMART Cyt_b5_2 151 224 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30233g00028 Stsc-Chr30233 144780 147087 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30233g00028 149 226 NADPH P450 reductases AT1G26340 41.026 1.31e-14 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30233g00028 - - ccaj:109814642 316.62