Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30233g00002 ATGCAAAATAAACAAGAGGTTAGAAGAGGAGAAGAAGATGAAGGACATGATGAAGAAGAAGGGAATAATAATAAGAATAAGGAGTCATCAGCTCCGTTATTGGCATTGAACCACGTTTCAAGGCTGTGTAGAGACGTGAAGAAATCGATAGAGTTCTACACCAAGGTGTTGGGGTTTGTCCTTATTGAGAGGCCTCAAGTTTTGGACTTCGAAGGTGCATGGTTGTTCAACTATGGTGTTGGTATCCACTTGGTTCAATCTGACCAAGAAGATCGATTGCCTAACGATACTCAAGACTTGGATCCTCAAGACAATCATATATCTTTTCAGTGTGAAGATATGGAAGATATGAAAAGAAAATTGAAGGAGATGAATGTGAAGTACAAGAAACGGACGCTGGAAACAGAAGATGGAAAAGCAATGGATCAACTTTTCTTCAACGACCCAGATGGGTTCATGGTTGAAATTTGCAACTGTGAGAATCTCAAACTCGTCCCTGCTGGTTCACTTGGCAAAATTAAGTTGCCAATAGATCGCCACACCCCACCCGTGGACACTAATCATCAGAACCACCATAATAATAATCAATGA 591 0.4061 MQNKQEVRRGEEDEGHDEEEGNNNKNKESSAPLLALNHVSRLCRDVKKSIEFYTKVLGFVLIERPQVLDFEGAWLFNYGVGIHLVQSDQEDRLPNDTQDLDPQDNHISFQCEDMEDMKRKLKEMNVKYKKRTLETEDGKAMDQLFFNDPDGFMVEICNCENLKLVPAGSLGKIKLPIDRHTPPVDTNHQNHHNNNQ 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30233g00002 196 MobiDBLite consensus disorder prediction 1 31 - -
Stsc30233g00002 196 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 32 158 IPR029068 -
Stsc30233g00002 196 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 35 159 IPR037523 -
Stsc30233g00002 196 PANTHER - 24 191 - -
Stsc30233g00002 196 Gene3D - 37 159 IPR029068 -
Stsc30233g00002 196 Coils Coil 111 134 - -
Stsc30233g00002 196 CDD VOC_like 36 156 - -
Stsc30233g00002 196 MobiDBLite consensus disorder prediction 1 25 - -
Stsc30233g00002 196 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 36 156 IPR004360 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30233g00002 Stsc-Chr30233 8095 9332 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30233g00002 44 162 Calmodulin-binding Proteins AT1G08110 24.324 7.82e-06 43.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30233g00002 - - aip:107629668 293.123