Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30232g00027 ATGGAATGTGAAGAAGAAGAAGAAGAAGAAGAAAGCGAATTGGTAAAAGTAAAGGGCATCATTCTGAAGCGGAAGATCGGAGAGGGGTCGTTCTCGGCAGTGTGGAGGGCGGAGGAGAGAGGCAGCGGCGAAGAGGTGGCGGTGAAACAGGTGTTCCTCTCCAAACTCAGCCCTCGCCTCAAGTCATCCTTCCACTGCGAGCTCAATTTCTTGTCCTCCGTCAACCACCCCAACATCGTTCGCCTCCTCAATTTCTTCCAGGATGATGGATGTGCGTACTTGGTGATGGAGTTTTGTGCTGGGGGGAACCTTGCTTCTTATATTCGATGCAATGGGAGAGTTCAACAACAAACTGCCAGAACATTCATGCAGCAGCTTGGTGCTGGTATGAAAATATTACAAAGTCATGGTATCATTCATAGAGATTTGAAACCAGAGAACATTTTGCTATCAAAACCTGGAGAGGATGCGGTTCTAAAGATAGCAGACTTTGGTCTCTCAAGAACTCTACTTCCGGGCGAGTATGCGGAGACAGTCTGTGGTACACCATTATACATGGCACCAGAAGTTCTTCAGTTCCAGAAATATGATAGCAAGATATGTGGAGTATTGGGGCTATTCTGTTTGAGCTTCTAA 636 0.467 MECEEEEEEEESELVKVKGIILKRKIGEGSFSAVWRAEERGSGEEVAVKQVFLSKLSPRLKSSFHCELNFLSSVNHPNIVRLLNFFQDDGCAYLVMEFCAGGNLASYIRCNGRVQQQTARTFMQQLGAGMKILQSHGIIHRDLKPENILLSKPGEDAVLKIADFGLSRTLLPGEYAETVCGTPLYMAPEVLQFQKYDSKICGVLGLFCLSF 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30232g00027 211 SMART serkin_6 20 211 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30232g00027 211 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Stsc30232g00027 211 ProSiteProfiles Protein kinase domain profile. 20 211 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30232g00027 211 Pfam Protein kinase domain 23 200 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30232g00027 211 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 7 199 IPR045269 GO:0004674|GO:0006914
Stsc30232g00027 211 Gene3D Transferase(Phosphotransferase) domain 1 3 205 - -
Stsc30232g00027 211 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
Stsc30232g00027 211 SUPERFAMILY Protein kinase-like (PK-like) 17 200 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30232g00027 Stsc-Chr30232 210804 212690 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30232g00027 24 210 CBL-interacting serine-threonine protein kinases AT5G35410 40.306 1.75e-35 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Stsc30232g00027 Pkinase 6.5e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30232g00027 - - lja:Lj1g3v1289070.2 298.516