Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30231g00032 ATGGACATTGGATTTGTCGTCCTACCGGTTCCCCAACGGTTTGAGGCAGCACTTGCAGCCTTATCTACTCTTATAGATGATGGAGTGGATATTGAGCAAGGAGTACAGGTGTTGTGTGAGGCAGAGGGAGTAAGGCTTATACTCGATGTATTACTCGAGAAACGGACAGAGAACTTGCGGCGGAGGGCAGTTTGGACAGTGGAGAGATTGTTGCGAACAGAGGATATAGCCTATGAAGTTTCAGGTGATCAAAATGTCAGCACTGCACTGGTGGATGCTTTCCAGCACGGCGACTACCGAACTAGGCAGATTGCAGAGCGTGCCCTCAAGCATGTTGATAAGATACCAAACTTCTCTGGAATCTTCCCAAACATGGGAGGAGCGTAA 387 0.4858 MDIGFVVLPVPQRFEAALAALSTLIDDGVDIEQGVQVLCEAEGVRLILDVLLEKRTENLRRRAVWTVERLLRTEDIAYEVSGDQNVSTALVDAFQHGDYRTRQIAERALKHVDKIPNFSGIFPNMGGA 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30231g00032 128 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 14 122 - -
Stsc30231g00032 128 SUPERFAMILY ARM repeat 15 111 IPR016024 -
Stsc30231g00032 128 Gene3D - 9 117 IPR011989 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30231g00032 17 126 U-box Gene Family AT1G76390 69.091 4.39e-47 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30231g00032 - - adu:107460240 213.772