Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc30231g00022 | ATGGGAAACTGTTTCCAGAAGCCGAGGAATAATAATAATAACAAGATTAACGAGCATCATGGTTTTAATTCCGATAATAATAATAACAAACCACATGCAGAAAGAATCAAGGAGAAGGGAGTGACGATGAAGAAGGATATGGCGGCGGTGAATACGGTGACAAGGAATCTAAGAATGTTCACGTTGGATGAGCTGAAAACTGCGACGAGGAATTTCAGACCGGATACTATGCTAGGTGAAGGTGGTTTTGGTCGTGTTTTTAAAGGGTGGGTTGACCAAAATACCCTCAAGCCTTCCAAAGTCGGAGTTGGAATCCCCGTCGCCGTTAAGAAGTCTAACCCCGACAGCCTCCAAGGCCTCCAAGAATGGCAGAGTGAGGTGAAATTCTTAGGGAAGTTTTCTCATCCGAACCTGGTTAAACTAGTTGGGTACTGCTGGGAGGAGAATCAATTCTTGCTAGTATATGAATACATGCAAAAGGGTAGCTTGGAAAATCACCTCTTCAGAAGTCCAGAACCACTTGCATGGGATATAAGGATAAAGATAGCCATTGGAGCTGCAAGAGGGTTGGATTTCTTACATACATCTGAGAAATCAGTCATCTATAGAGACTTCAAGTCCTCTAACATTCTTCTTGACGGGGATTATAACGCAAAGCTGTCAGATTTTGGATTGGCAAAGCTTGGTCCAGTCAACGGTAGATCCCATGTAACCACACGTGTCGTTGGAACCTACGGTTATGCCGCCCCTGAGTATATGGCAACAGGTCATTTGTACGTGAAAAGCGATGTATATGGATTTGGGGTAGTTTTATTAGAAATGTTAACGGGCCTAATTGCGTTAGACACAAATAGGCCCTCAGGTCAGCAGAATTTAGTAGAGTGGATTAAGCCATCTTTATATGAAAAGAGGAAATTAAAGAAAGTAATGGATCCAAATTTGAGTGAACAATATCCCATGAAAGCTGCTCTTGAAATGGCACACCTTATATTAAAATGCTTGGAAGAAGACCCAAAGAACCGACCCTCCATGGAACAGGTCTTACAAACATTAGAGAAGGTACAAATCATAAAATATAAACACAAGGTCAAGAAAGAGAGAGCCACAACAATGCATCATCAACATCAACAACGTCATCAGTAG | 1143 | 0.4182 | MGNCFQKPRNNNNNKINEHHGFNSDNNNNKPHAERIKEKGVTMKKDMAAVNTVTRNLRMFTLDELKTATRNFRPDTMLGEGGFGRVFKGWVDQNTLKPSKVGVGIPVAVKKSNPDSLQGLQEWQSEVKFLGKFSHPNLVKLVGYCWEENQFLLVYEYMQKGSLENHLFRSPEPLAWDIRIKIAIGAARGLDFLHTSEKSVIYRDFKSSNILLDGDYNAKLSDFGLAKLGPVNGRSHVTTRVVGTYGYAAPEYMATGHLYVKSDVYGFGVVLLEMLTGLIALDTNRPSGQQNLVEWIKPSLYEKRKLKKVMDPNLSEQYPMKAALEMAHLILKCLEEDPKNRPSMEQVLQTLEKVQIIKYKHKVKKERATTMHHQHQQRHQ | 380 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc30231g00022 | 380 | Gene3D | Phosphorylase Kinase; domain 1 | 42 | 157 | - | - | |
Stsc30231g00022 | 380 | ProSiteProfiles | Protein kinase domain profile. | 72 | 354 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc30231g00022 | 380 | PANTHER | OS01G0588500 PROTEIN-RELATED | 33 | 355 | - | - | |
Stsc30231g00022 | 380 | Pfam | Protein tyrosine and serine/threonine kinase | 76 | 351 | IPR001245 | GO:0004672|GO:0006468 | |
Stsc30231g00022 | 380 | SUPERFAMILY | Protein kinase-like (PK-like) | 51 | 354 | IPR011009 | - | |
Stsc30231g00022 | 380 | MobiDBLite | consensus disorder prediction | 1 | 31 | - | - | |
Stsc30231g00022 | 380 | FunFam | Serine/threonine-protein kinase PBS1 | 158 | 370 | - | - | |
Stsc30231g00022 | 380 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - | |
Stsc30231g00022 | 380 | Gene3D | Transferase(Phosphotransferase) domain 1 | 158 | 378 | - | - | |
Stsc30231g00022 | 380 | ProSitePatterns | Protein kinases ATP-binding region signature. | 78 | 111 | IPR017441 | GO:0005524 | |
Stsc30231g00022 | 380 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 200 | 212 | IPR008271 | GO:0004672|GO:0006468 | |
Stsc30231g00022 | 380 | PIRSF | ILK | 11 | 372 | - | - | |
Stsc30231g00022 | 380 | FunFam | Serine/threonine-protein kinase BIK1 | 39 | 157 | - | - | |
Stsc30231g00022 | 380 | CDD | STKc_IRAK | 78 | 353 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc30231g00022 | Stsc-Chr30231 | 158533 | 161296 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc30231g00022 | 3 | 351 | Glycoside Hydrolase | AT3G07070 | 45.205 | 1.50e-101 | 305 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-2 | Stsc30231g00022 | PK_Tyr_Ser-Thr | 2.6e-48 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc30231g00022 | - | - | aprc:113865973 | 543.888 |