Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30230g00016 ATGTACTTGGAACTCTACTTAGTCTCAATAGGGTTCTTGATTCTTGAGGGTGATAACTTGAATGAGCTCTTCCCTAACGTTGAGCTCAAATTGGTGCCCGGGTTAACAATTAGTGGGAAGGAATTCTTTGTGATTTTGGTTGCTCTTATAATCTTGCCAACTGTTTGGTTGGATGATATGAGCATGCTCTCTTATGTATCTGCAAGTGGTGTGTTTGCCTCTGCTATTATCATCATCTCGATATCTTGGACCGCCACGCTTGGCGAAGTTGGTTTTCATCACAAGGGAACTCTTCTGAATTTGAGTGGAATCCCCACATCTGTTCTATTGGTGTGTTTTATTTTAACCACAGCTGGTTATGCAGCCATGGCTATAATCGGATACCTCATGTTCGGTCCAAATGTTGAATCACAAGTAACATTGAACCTGCCAATAGACAAACTAAGCTCAAGAGTAGCAATTTACACAACATTGGTCAATCCAATATCAAAGTATGCTTTGATGACAACACCTATCACCAATGGTTTGAAAAACTTGCTTCCAAGAAGGTATAAGAATAGATTCACCAAAACTTTGGTGAGCACTTTGATGGTAGTTAGCACTGTCATTATTGCCATAACTGTGCCTTTATTTGGGGAACTGATGTCCCTGGTTGGAGCATTTCTAAGTGTCACAGCTTCTATTCTTCTCCCATGCTCATGCTACTTGAAGATCTCAGGAAAATACAGGATTTTGGGGTGTGAAACAATAGCCATAGTGGCTATAATTGTAGCAGCTGTGGTAATTGGAATAGCTGGGACATATACCTCAATCATGGATATTGTGCACCATTTGTAA 837 0.4038 MYLELYLVSIGFLILEGDNLNELFPNVELKLVPGLTISGKEFFVILVALIILPTVWLDDMSMLSYVSASGVFASAIIIISISWTATLGEVGFHHKGTLLNLSGIPTSVLLVCFILTTAGYAAMAIIGYLMFGPNVESQVTLNLPIDKLSSRVAIYTTLVNPISKYALMTTPITNGLKNLLPRRYKNRFTKTLVSTLMVVSTVIIAITVPLFGELMSLVGAFLSVTASILLPCSCYLKISGKYRILGCETIAIVAIIVAAVVIGIAGTYTSIMDIVHHL 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30230g00016 278 Pfam Transmembrane amino acid transporter protein 1 81 IPR013057 -
Stsc30230g00016 278 Pfam Transmembrane amino acid transporter protein 106 270 IPR013057 -
Stsc30230g00016 278 PANTHER OS05G0424000 PROTEIN-RELATED 1 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30230g00016 Stsc-Chr30230 155146 156431 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30230g00016 1 275 Amino Acid or Auxin Permease AAAP Family AT3G28960 51.148 4.64e-104 307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30230g00016 K15015 - gmx:100794374 367.081