Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30229g00041 ATGTTGGCTGGGTGTTCTAGTTCTACATTGTTGTCACCAAGGCATAGATTGAGGAGCGAACCATCACCACAGTTTCATCATCAAGCTTGTCATCTTCAGCTACCACCTTCCATGAGCACGCAGAGATTGGACTTGCCAGCTTCAGCTTGCACCTTTCCAAGGAACAACAAAGTCTCACCAAGGCCTTCTGTTGTCACCACCAACACCAACACCAACAACAACAAGCCCATTGAAGCCAAGACAACCTCTTACTCTCTCAAACAACACATTAGGCTTCCACCATTGGCAACCACACCACAAGTCATCACATCTGCACCACCTTCACCCTTCCTTGAAGCCAAAGACGAGCCCTTCTGGGACACAACCAACAACAGGAGCTTGAAGAAGAGGCCAGTGGATGCTGATGATTCTTTTGATAGCAGAGCCAAGAGGAAGAAGAGTAGCAACAGCACCACCAGCGACAATGGCGATTCTTCCGATGATGTTATGGAAGAAGAAGGAGGACACAGGATAACAGGAGAGGCTCTGAGTTTATCTGCAAACTTCTGGTTACAGCCATCTTCACTTCCTCCATTCTCACTAACATGTTCAGGGGACGAAGAGAGGGTGTGCTTCGTTCCAAGCGAAGTGGTTTCCGCTCCTTGGACGGAATCCGCAATAACAAAGATCACAAACCATGGTGAGAAGGAAGGCGAGGGTGGTGGCAGCCGCGGCTTCCCGCCGCCACAACCCTCAGCTTCCTCCAACACCTCATCAGAGAGCCAAGGTTTAAGCCTCAGGCTGAACGAGAATCCTGAAGTCGGAAATGGTTCTGGTAACCCTTACCATAACCACCACCACCACCATCATGAAGAAACCACCGCGGAGGAAGACGAAGATATCCAAGAGGAGCACCGTGGATTCGAGCTTGTTAGTTTACTGACCGCATGCGTTGAAGCCATTGGAGCAAAGAACATCGCCGCAATCAACCATTTCATAGCGAAATTAGGAGATCTTGCTTCACCAAGGGGAACAAGTTCAATGAGCCGAATCTGTTCTTACTTCACAGAAGCCCTAGCCATAAGAGTGACGAGGCTATGGCCTCAAGTTTTCCACATCACCATCCCTCGCGAGCTCGATCGTGTTGTGGAGGACGAAAACGGCACTGCATTGAGGCTCTTGAATCAAATCACACCGATCCCTAAGTTCCTTCACTTCACATCGAACGAGATGCTGCTGAGAGCCTTCGAAGGCAAAGACAGAGTCCACATCATCGATTTCGACATCAAGCAAGGTCTTCAATGGCCGAGCTTGTTCCAGAGCTTGGCTTCCAGATCCAACCCTCCCAGCCACGTCAGAATCACCGGGATCGGCGAATCCAAGCAAGATCTGAACGAAACAGGTGACAGGCTCGCCGGTTTCGCGGAGGCGCTGAACCTTCCGTTCGAGTTCCATGGAGTGGTGGACAGGCTGGAAGACGTGAGGCTGTGGATGCTNNNNNNNNNNCACGAAACCGTTGCGGTGAACTGCGTGTTCCAGCTTCACAAGACTCTGTACGACGTAAATGGCGGAGCGCTGAGAGATTTCTTGGGACTGATACGAAGCACGAACCCTGCAATGGTGGTTGTGGCAGAGCAAGAAGCAGAGCACAACGATATGAGGTTGGAGGCTAGGGTTTGCAACTCGTTGAAATACTACTCAGCGTTGTTTGATTCAGTTGAGCACTGTCTTGAAGGGGATAGCAGCGCGAGGAGGAAGATAGAGGAGATGTTTGGGAGGGAGATAAGGAACATTGTGGCTTGTGAAGGGAGTGATAGATTGGAGAGGCATGAAGGTTTTGGGAAATGGAGGAAGATGATGGTGGATCAAGGAGGGTTCAGGTGCTTGGGTGTTACTGATAGAGAAAGAGTTCAGAGCCAGTTGCTGATGAAGATGTACCCTTGTGACAGTTACACTGTGAGGAGTCATGGCGGCGGCGGTTTAAGTGAGGCACTCAGTCTTTGTTGGATGGATATTCCTCTGTTCACTGTTTCAGCTTGGGCACCTCTTGATGGAGGAACTTCTTCATCTGTTTCTCAGCCGATTTGA 2067 0.4993 MLAGCSSSTLLSPRHRLRSEPSPQFHHQACHLQLPPSMSTQRLDLPASACTFPRNNKVSPRPSVVTTNTNTNNNKPIEAKTTSYSLKQHIRLPPLATTPQVITSAPPSPFLEAKDEPFWDTTNNRSLKKRPVDADDSFDSRAKRKKSSNSTTSDNGDSSDDVMEEEGGHRITGEALSLSANFWLQPSSLPPFSLTCSGDEERVCFVPSEVVSAPWTESAITKITNHGEKEGEGGGSRGFPPPQPSASSNTSSESQGLSLRLNENPEVGNGSGNPYHNHHHHHHEETTAEEDEDIQEEHRGFELVSLLTACVEAIGAKNIAAINHFIAKLGDLASPRGTSSMSRICSYFTEALAIRVTRLWPQVFHITIPRELDRVVEDENGTALRLLNQITPIPKFLHFTSNEMLLRAFEGKDRVHIIDFDIKQGLQWPSLFQSLASRSNPPSHVRITGIGESKQDLNETGDRLAGFAEALNLPFEFHGVVDRLEDVRLWMLXXXHETVAVNCVFQLHKTLYDVNGGALRDFLGLIRSTNPAMVVVAEQEAEHNDMRLEARVCNSLKYYSALFDSVEHCLEGDSSARRKIEEMFGREIRNIVACEGSDRLERHEGFGKWRKMMVDQGGFRCLGVTDRERVQSQLLMKMYPCDSYTVRSHGGGGLSEALSLCWMDIPLFTVSAWAPLDGGTSSSVSQPI 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30229g00041 688 MobiDBLite consensus disorder prediction 1 26 - -
Stsc30229g00041 688 MobiDBLite consensus disorder prediction 1 15 - -
Stsc30229g00041 688 MobiDBLite consensus disorder prediction 51 88 - -
Stsc30229g00041 688 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 254 669 IPR005202 -
Stsc30229g00041 688 MobiDBLite consensus disorder prediction 118 150 - -
Stsc30229g00041 688 MobiDBLite consensus disorder prediction 51 172 - -
Stsc30229g00041 688 MobiDBLite consensus disorder prediction 278 297 - -
Stsc30229g00041 688 Pfam GRAS domain family 303 673 IPR005202 -
Stsc30229g00041 688 MobiDBLite consensus disorder prediction 217 297 - -
Stsc30229g00041 688 MobiDBLite consensus disorder prediction 241 271 - -
Stsc30229g00041 688 ProSiteProfiles GRAS family profile. 294 674 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30229g00041 Stsc-Chr30229 243448 246813 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30229g00041 1 673 GRAS Transcription Factor Family AT1G63100 55.446 0.0 642
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Stsc30229g00041 GRAS 2e-121 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30229g00041 - - lang:109333178 801.586