Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30229g00039 ATGAAAAGGTATGGAGAAATCTTCAAGACTCACTTGGTGGGGAAACCGTTGGTGGTATCAACAGACCCTGATCTGAATTACCTCATATTCCAACAAGAGGGGCAACTGTTCCAGAGTTGGTACCCTGAGACATTCACTGAGATCTTTGGGAGACAGAGTATAGGATCATTACATGGATTCATATACAAATACCTCAAGAACATGGTGCTGAGTCTCTTTGGTCCTGAAAGCCTCAAGAATATGCTCTCTGAGGTTGAACATGCAGCATGCACATGCTTGCAACAGTGGTCATGCCAGGACACTGTTGAACTTAAAGAAGCAACAGCCACCATGATATTTGATTTAACTGCCAAAAAACTCATCAGTTATGACTCCAAGAATTCATCAGAGAATCTAATGGAGAACTTTGTTGCATTTATGAAAGGACTTATCTCCTTCCCTCTTGATCTTCCAGGAACAGCATATCATAAATGTCTTCAGGGTAGGAAAAGGGCAATGGAGATGCTGAAGAAGATGCTTGAGGAAAGAAGAGCAAACCCAAGGAAAGAGCAGAGTGATTTCTTTGACTATGTATTGGAAGAACTGAAGAAAGAGGGAACAATCTTGACAGAAGCCATAGCCTTGGACCTCATGTTTGTCCTCCTCTTTGCAAGCTTTGAAACCACTTCTCTCGCCATCACGTATGCCATCAAAGTCCTCTCTCACAATCCCTTGGTTCTCAAGAAACTACAAGAGGAACATGAAGCCATACTCAAAAGACGTGAAGATCCTAACTCCGGAATCACTTGGAAAGAATACAAATCAATGACATATACATTTCAGTTCATGAATGAAACCGTGAGACTTGCAAATATAGTTCCAGGAATCTTCAGAAAGTCACTAAGCGAAGTTAATTTCAAAGGATATACCATACCAGCAGGTTGGGCGGTAATGGTGTGTCCCCCAGCTGTTCACTTGAATCCAGCCAAATATCAGGATCCTCTCTCCTTCAACCCCTCCAGATGGGAGGGAATAGAAATGAATGGTTCAACCAAAGAATTCATGGCTTTCGGTGGAGGCATGAGATTTTGTGTTGGAGCAGACTTCACTAAGGTTCAGATGGCTGTCTTTATTCATAGCTTGGTAACCAAGTACAGGTGGAACACTATCAAAGGAGGGAATACTATTAGAACGCCTGGATTACAATTTCCAGATGGATTTCATGTTCAGATGATCAGAAGAGATCAAAGTAATCAAGAATCAGAATGTTCCATTACAAATTAG 1263 0.4165 MKRYGEIFKTHLVGKPLVVSTDPDLNYLIFQQEGQLFQSWYPETFTEIFGRQSIGSLHGFIYKYLKNMVLSLFGPESLKNMLSEVEHAACTCLQQWSCQDTVELKEATATMIFDLTAKKLISYDSKNSSENLMENFVAFMKGLISFPLDLPGTAYHKCLQGRKRAMEMLKKMLEERRANPRKEQSDFFDYVLEELKKEGTILTEAIALDLMFVLLFASFETTSLAITYAIKVLSHNPLVLKKLQEEHEAILKRREDPNSGITWKEYKSMTYTFQFMNETVRLANIVPGIFRKSLSEVNFKGYTIPAGWAVMVCPPAVHLNPAKYQDPLSFNPSRWEGIEMNGSTKEFMAFGGGMRFCVGADFTKVQMAVFIHSLVTKYRWNTIKGGNTIRTPGLQFPDGFHVQMIRRDQSNQESECSITN 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30229g00039 420 FunFam Cytochrome P450 family protein 1 406 - -
Stsc30229g00039 420 PRINTS P450 superfamily signature 217 234 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30229g00039 420 PRINTS P450 superfamily signature 274 285 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30229g00039 420 PRINTS P450 superfamily signature 348 357 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30229g00039 420 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30229g00039 420 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 350 359 IPR017972 GO:0005506|GO:0016705
Stsc30229g00039 420 Gene3D Cytochrome P450 1 405 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30229g00039 420 PRINTS E-class P450 group I signature 313 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30229g00039 420 PRINTS E-class P450 group I signature 273 291 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30229g00039 420 PRINTS E-class P450 group I signature 206 223 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30229g00039 420 PRINTS E-class P450 group I signature 1 19 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30229g00039 420 PRINTS E-class P450 group I signature 226 252 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30229g00039 420 PRINTS E-class P450 group I signature 347 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30229g00039 420 PRINTS E-class P450 group I signature 357 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30229g00039 420 PANTHER CYTOCHROME P450 26 3 383 - -
Stsc30229g00039 420 CDD CYP90-like 1 403 - -
Stsc30229g00039 420 Pfam Cytochrome P450 2 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30229g00039 420 SUPERFAMILY Cytochrome P450 2 407 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30229g00039 Stsc-Chr30229 203562 208840 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30229g00039 1 407 Cytochrome P450 AT1G12740 71.186 0.0 633
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30229g00039 - - aip:107642960 776.163