Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30227g00005 ATGGCTTCCGACGGTGCTACATCGGCGGCGACCAGCCGGAGGAAGCCGTCGTGGCGTGAGAGGGAGAACAATCGGAGGAGAGAGAGGAGGAGGAGAGCTATAGCGGCCAAGATCTACGCCGGTTTGCGAGCTCAGGGGAACTACAACTTGCCGAAACACTGTGATAACAACGAGGTGCTTAAAGCGCTCTGTGCTGAAGCTGGTTGGGCCGTTGAAGAAGACGGAACCACTTATCGCAAGGGTTGCAAGCCACCTTTGGCCAATAATGGTGCAGGCACTTCCTCCAGAAACACACCTTTCTCTTCACAGAATCCTAGTCCTCTGTCTTCATCTTTTCCGAGTCCAATTCCTTCCTACCAAGTCAGTCCTACTTCCTCCTCTTTCCCGAGCCCTTTCCGTTTGGACAGAGAGAACACATCGAACCTCATTCCATACATTCGGAATGCTATTCCTGCATCCCTCCCTCCTCTAAGGATATCAAATAGTGCCCCTGTGACGCCGCCTCTGTCATCGCCGACTTCAAGAAATCCTAAACCTATTCCTACATGGGAAGCTATTGCTAAAGAATCCATGTCGTCCTTCAATTATCCTTTCTTTGCAGCTTCGGCCCCCGCTAGCCCCACACACAGACAATTTTATACCCCCGCAACTATTCCGGAATGTGACGAGTCGGATACTTCCTCCACCATTGAGTCTGGCCAGTGGCTGAAATTCCAAGCATTTGGACCCTCAGCATCGGCAATGCCAACATCTCCAACCTTCAATCTTGTTAACCCGGTAGTCACTCAGCACTGTGTGCCTGATAAAGCAATCCAAGAGCTGAGAATAAGTTCAGCAGAAGAGTTTGGGGTACAGCCACAGGTAAAGCCTTGGGTTGGAGAAAAAATTCATGAGGTAGGATTGGATGATTTGGAGCTTACACTTGGAAGCGGAAAAGCACGGAGTTAG 948 0.5042 MASDGATSAATSRRKPSWRERENNRRRERRRRAIAAKIYAGLRAQGNYNLPKHCDNNEVLKALCAEAGWAVEEDGTTYRKGCKPPLANNGAGTSSRNTPFSSQNPSPLSSSFPSPIPSYQVSPTSSSFPSPFRLDRENTSNLIPYIRNAIPASLPPLRISNSAPVTPPLSSPTSRNPKPIPTWEAIAKESMSSFNYPFFAASAPASPTHRQFYTPATIPECDESDTSSTIESGQWLKFQAFGPSASAMPTSPTFNLVNPVVTQHCVPDKAIQELRISSAEEFGVQPQVKPWVGEKIHEVGLDDLELTLGSGKARS 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30227g00005 315 MobiDBLite consensus disorder prediction 88 133 - -
Stsc30227g00005 315 MobiDBLite consensus disorder prediction 1 31 - -
Stsc30227g00005 315 MobiDBLite consensus disorder prediction 76 133 - -
Stsc30227g00005 315 Pfam BES1/BZR1 plant transcription factor, N-terminal 12 140 IPR008540 -
Stsc30227g00005 315 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 7 314 IPR033264 GO:0003700|GO:0006351|GO:0009742
Stsc30227g00005 315 MobiDBLite consensus disorder prediction 14 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30227g00005 Stsc-Chr30227 24431 26753 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30227g00005 13 314 BZR Transcription Factor Family AT1G75080 70.662 1.27e-128 368
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Stsc30227g00005 BES1_N 5.8e-62 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30227g00005 K14503 - gmx:100807071 436.417