Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30226g00054 ATGAAGGCTTATTTTGAGACTGGAAAAACAAAGGAAGCACCATGGAGAGAATCTCAGCTTAAAGCTTTGCTTAAATTCCTTCTTGAAAATGAGGATCACATCTTCAACGCCCTCAACAACGATCTCGGCAAGCATCAAGTTGAAGCTTTTAGAGACGAGGTGGGAACTTTGATTAAGACCTTAAATTTAGCCATCAAGTCTTTGAAACAATGGATGGCGGGCAAAGAGGCTAAACTGCCAAGAATAGCGCTGCTTTCAAGTGCAGAAATAGTTCCTGAGCCTCTTGGTCTTGTTCTCATATTCTCATCATGGAATTTCCCCCTCGGACTGTCATTGGAGCCACTAATAGGAGCTGTAGCTGCTGGAAACAGTGTAGTTTTGAAGCCATCAGAGATGTCACCTGCTTGTTCTTCTCTTCTCACCACTGTTCTTCCTTCTTACTTGGATTCCAACGCTATTATGATCATCCAAGGTGGACCTTCTCTTGGGGAGCTACTCTTAAAGCAAACATGGGACAAGATCTTTTTCACAGGAAGTGCAAGAGTGGGGAAGATTGTTATGAGTGCAGCAGCAGAAAATCTGACACCCGTGACTCTGGAATTGGGAGGAAAATGTCCTGCATTGCTTGACTCCCTTACAAGTTCTTGGGATAGAGAGGTGGCCGTGAAACGAATTTTGGTGGCCAAATATGGAGCTTGTGCAGGACAAGCATGCATAACCATCGATTATGTTCTTGTAGAAAACTCTTTCGTTTCTACATTGTTGCCATTAATGAAGGTTTGGATTAAGAAAATGTTTGGAGAAGACCCAAAAGGTTCCAACAGCATTGCAAGGATAGTTAATAAACAACATTTCTTGAGACTCAAGTCTCTTATCAATGATGATTCTAAGGTCAAAGAATCGGTTGTTATTGGTGGCTCATTTGACGAAGATAATTTATTTATTGAACCAACCATATTGGTGGATCCACCTCTTGACTCTGCAATCATGACAGAAGAAATTTTTGGCCCACTCCTTCCAATTATCACTGTGGAGAAGATTGAAGATAGTATTGGATTCATAAAGTCAAGGCCGAAACCTCTAGCAATCTATGCTTTTACTAAAAACAAATCTCTACAGAAAAGGATGTTAGACGAGACATCTTCTGGAAGTCTTGTATTCAATGATGCAATTCTACAATATGCAGCTGATACCCTGCCATTTGGAGGAGTTGGTGAGAGTGGATTTGGGAAGTACCATGGCAAGTTCTCCTTTGACACTTTCAGTCACCACAAGGCAGTGGCTAGAAGAAGTTACTATACAGATTTTTGGTTCAGGTTTCCTCCATGGACTCTTAACAAGCTTCAACTCCTTGAGGTCGCTTATAATTTGGATTATATTGGGATGCTCCTTGTCATTCTGGGTTTGAAGAGATCAAAACGAAGATTAATTAATCAAGAGGAAAAGCTACACGACAAACAATTCTAA 1467 0.409 MKAYFETGKTKEAPWRESQLKALLKFLLENEDHIFNALNNDLGKHQVEAFRDEVGTLIKTLNLAIKSLKQWMAGKEAKLPRIALLSSAEIVPEPLGLVLIFSSWNFPLGLSLEPLIGAVAAGNSVVLKPSEMSPACSSLLTTVLPSYLDSNAIMIIQGGPSLGELLLKQTWDKIFFTGSARVGKIVMSAAAENLTPVTLELGGKCPALLDSLTSSWDREVAVKRILVAKYGACAGQACITIDYVLVENSFVSTLLPLMKVWIKKMFGEDPKGSNSIARIVNKQHFLRLKSLINDDSKVKESVVIGGSFDEDNLFIEPTILVDPPLDSAIMTEEIFGPLLPIITVEKIEDSIGFIKSRPKPLAIYAFTKNKSLQKRMLDETSSGSLVFNDAILQYAADTLPFGGVGESGFGKYHGKFSFDTFSHHKAVARRSYYTDFWFRFPPWTLNKLQLLEVAYNLDYIGMLLVILGLKRSKRRLINQEEKLHDKQF 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30226g00054 488 SUPERFAMILY ALDH-like 2 444 IPR016161 GO:0016491
Stsc30226g00054 488 PIRSF ALDH 1 463 IPR012394 GO:0006081
Stsc30226g00054 488 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 3 425 IPR016162 GO:0016491
Stsc30226g00054 488 FunFam Aldehyde dehydrogenase 203 407 - -
Stsc30226g00054 488 FunFam Aldehyde dehydrogenase 2 206 - -
Stsc30226g00054 488 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 203 407 IPR016163 GO:0016620
Stsc30226g00054 488 PANTHER ALDEHYDE DEHYDROGENASE 2 469 IPR012394 GO:0006081
Stsc30226g00054 488 Pfam Aldehyde dehydrogenase family 5 427 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30226g00054 Stsc-Chr30226 228213 231313 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30226g00054 1 471 Aldehyde Dehydrogenase Gene Family AT4G36250 53.928 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30226g00054 K00128 - gmx:100819197 776.548