Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30226g00049 ATGGCTTCCTCCGTAGCTCTAACCACCGCCTTCTCCACCCTTCCTTCTCTCCGACAACGCCCTCACTCAAACCACCTAACTCCATCACTCTCCTATCCTCCAAAACGCCGCCGTTTCACTCCGTCACTCCAACACTCTTTCAACGTCAACACCAAACACAATTGGAGCCCTAAAAAACTATCCAATGTAAGTAGCTTAGTCAGAGCTTCAGCCGCCGGAGCTTCTGTAACTCCGGCGCCGGCACCGGCATGGCAAGGCGCAGCCATAAAGCCTCTTCTAGCTTCCATAGCCACTGGAGCTATCATCTGGTTCGCTCCCGTCCCCAACGGCGTCACCAAAATCGCTTGGCAGCTGCTCGCAATTTTCCTGGCCACCATCGTCGGAATCATCACGCAGCCACTTCCACTCGGTGCGGTGGCGTTGTTAGGCCTCGGCGTATCGGTCCTCACCAAAACCCTAACGTTCGCGGCGGCGTTCTCCGGTTTCGGCGATCCCATCCCCTGGCTCATCTGCTTCGCTTTCTTCTTCGCCAAAGGATTCATCAAAACCGGTCTCGGAAACCGCGTCGGTTACCAGTTCGTCTCCCTCTTCGGTAGCTCCACGCTAGGGTTAGGTTACAGCCTGGTGTTCAGCGAGGCCTTGCTTGCGCCGGCGATTCCGTCGGTTTCAGCGAGAGCCGGAGGTATCTTCCTGCCGCTGGTGAAGTCTCTGTGCGCCGCGTGCGGGAGCAACCCCGGCGACGGAACGGAGAGGAAGCTCGGAGCGTGGTTGTCGCTGACGTGTTTTCAAACGTCGGTAATATCTTCGGCTATGTTCCTGACGGCGATGGCGGCGAACCCTCTGTGCGCAACTCTGACTCAGACCTCAATCAACCAAACGATTGGTTGGTTAGACTGGGCCAGAGCCGCCATTGTTCCCGGATTGGTGTCGTTGGTGGTAGTTCCCTTGTTACTATACATCGTTTACCCTCCAACTCTGAAATCAAGCCCCGATGCTCCGAAGCTTGCTCGTGAGAAGTTGCAGAACATGGGTCCTATGTCCTCTAATGAGAAGATTATGACTGCTACCTTGCTTCTTACGGTATTCAATTCTATTCCATTCAATCCATGCTTCTTATATGTAATTCTAAGCAAGTGTCGAGGTCGAATCCCGCCCTGTGCATGCAACAATCCGCTTGCCAGCGGCAAATCCTGCCTTAAATGA 1203 0.5445 MASSVALTTAFSTLPSLRQRPHSNHLTPSLSYPPKRRRFTPSLQHSFNVNTKHNWSPKKLSNVSSLVRASAAGASVTPAPAPAWQGAAIKPLLASIATGAIIWFAPVPNGVTKIAWQLLAIFLATIVGIITQPLPLGAVALLGLGVSVLTKTLTFAAAFSGFGDPIPWLICFAFFFAKGFIKTGLGNRVGYQFVSLFGSSTLGLGYSLVFSEALLAPAIPSVSARAGGIFLPLVKSLCAACGSNPGDGTERKLGAWLSLTCFQTSVISSAMFLTAMAANPLCATLTQTSINQTIGWLDWARAAIVPGLVSLVVVPLLLYIVYPPTLKSSPDAPKLAREKLQNMGPMSSNEKIMTATLLLTVFNSIPFNPCFLYVILSKCRGRIPPCACNNPLASGKSCLK 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30226g00049 400 Pfam Sodium:sulfate symporter transmembrane region 91 361 IPR001898 GO:0016020|GO:0022857|GO:0055085
Stsc30226g00049 400 NCBIfam DASS family sodium-coupled anion symporter 106 363 IPR001898 GO:0016020|GO:0022857|GO:0055085
Stsc30226g00049 400 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 45 362 IPR030676 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30226g00049 Stsc-Chr30226 210205 212972 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30226g00049 76 361 Antiporters AT5G12860 83.566 1.60e-164 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30226g00049 - - gmx:100793559 480.33