Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30226g00048 ATGGCTTCCTCCGTAGCTCTAACCACCGCCTTCTCCACCCTTCCTTCTCTCCGACAACGCCCTCACTCAAACCACCTAACTCCATCACTCTCCTATCCTCCAAAACGCCGCCGTTTCACTCCGTCACTCCAACACTCTTTCAACGTCAACACCAAACACAATTGGAGCCCTAAAAAACTATCCAATGTAAGTAGCTTAGTCAGAGCTTCAGCCGCCGGAGCTTCTGTAACTCCGGCGCCGGCACCGGCATGGCAAGGCGCAGCCATAAAGCCTCTTCTAGCTTCCATAGCCACTGGAGCTATCATCTGGTTCGCTCCCGTCCCCAACGGCGTCACCAAAATCGCTTGGCAGCTGCTCGCAATTTTCCTGGCCACCATCGTCGGAATCATCACGCAGCCACTTCCACTCGGTGCGGTGGCGTTGTTAGGCCTCGGCGTATCGGTCCTCACCAAAACCCTAACGTTCGCGGCGGCGTTCTCCGGTTTCGGCGATCCCATCCCCTGGCTCATCTGCTTCGCTTTCTTCTTCGCCAAAGGATTCATCAAAACCGGTCTCGGAAACCGCGTCGGTTACCAGTTCGTCTCCCTCTTCGGTAGCTCCACGCTAGGGTTAGGTTACAGCCTGGTGTTCAGCGAGGCCTTGCTTGCGCCGGCGATTCCGTCGGTTTCAGCGAGAGCCGGAGGTATCTTCCTGCCGCTGGTGAAGTCTCTGTGCGCCGCGTGCGGGAGCAACCCCGGCGACGGAACGGAGAGGAAGCTCGGAGCGTGGTTGTCGCTGACGTGTTTTCAAACGTCGGTAATATCTTCGGCTATGTTCCTGACGGCGATGGCGGCGAACCCTCTGTGCGCAACTCTGACTCAGACCTCAATCAACCAAACGATTGGTTGGTTAGACTGGGCCAGAGCCGCCATTGTTCCCGGATTGGTGTCGTTGGTGGTAGTTCCCTTGTTACTATACATCGTTTACCCTCCAACTCTGAAATCAAGCCCCGATGCTCCGAAGCTTGCTCGTGAGAAGTTGCAGAACATGGGTCCTATGTCCTCTAATGAGAAGATTATGACTGCTACCTTGCTTCTTACGGTGGGACTTTGGGTGTTTGGAGGGGTTCTTAACATAGATGCTGTAACTGCTGCGATTCTTGGATTAGCTGTACTTCTTGTTACAGGGGTTGTTACATGGAAAGAGTGCTTAGGAGAGGGTGTTGCATGGGATACTCTCACATGGTTTGCTGCTCTCATTGCAATGGCTGCTTACTTGAACAAATACGGTCTCATTGCTTGGTTCAGCCAAACTGTAGTCAAGGTTCTTTCTCAAACAGAGATAAGAGATGAAAGCATTTTCTTGGTAATTAATTAA 1356 0.5288 MASSVALTTAFSTLPSLRQRPHSNHLTPSLSYPPKRRRFTPSLQHSFNVNTKHNWSPKKLSNVSSLVRASAAGASVTPAPAPAWQGAAIKPLLASIATGAIIWFAPVPNGVTKIAWQLLAIFLATIVGIITQPLPLGAVALLGLGVSVLTKTLTFAAAFSGFGDPIPWLICFAFFFAKGFIKTGLGNRVGYQFVSLFGSSTLGLGYSLVFSEALLAPAIPSVSARAGGIFLPLVKSLCAACGSNPGDGTERKLGAWLSLTCFQTSVISSAMFLTAMAANPLCATLTQTSINQTIGWLDWARAAIVPGLVSLVVVPLLLYIVYPPTLKSSPDAPKLAREKLQNMGPMSSNEKIMTATLLLTVGLWVFGGVLNIDAVTAAILGLAVLLVTGVVTWKECLGEGVAWDTLTWFAALIAMAAYLNKYGLIAWFSQTVVKVLSQTEIRDESIFLVIN 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30226g00048 451 Pfam Sodium:sulfate symporter transmembrane region 91 438 IPR001898 GO:0016020|GO:0022857|GO:0055085
Stsc30226g00048 451 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 45 450 IPR030676 -
Stsc30226g00048 451 NCBIfam DASS family sodium-coupled anion symporter 106 441 IPR001898 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30226g00048 Stsc-Chr30226 210205 212972 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30226g00048 76 434 Antiporters AT5G12860 84.123 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30226g00048 - - gmx:100793559 604.749