Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30226g00047 ATGGCTTCCTCCGTAGCTCTAACCACCGCCTTCTCCACCCTTCCTTCTCTCCGACAACGCCCTCACTCAAACCACCTAACTCCATCACTCTCCTATCCTCCAAAACGCCGCCGTTTCACTCCGTCACTCCAACACTCTTTCAACGTCAACACCAAACACAATTGGAGCCCTAAAAAACTATCCAATGTAAGTAGCTTAGTCAGAGCTTCAGCCGCCGGAGCTTCTGTAACTCCGGCGCCGGCACCGGCATGGCAAGGCGCAGCCATAAAGCCTCTTCTAGCTTCCATAGCCACTGGAGCTATCATCTGGTTCGCTCCCGTCCCCAACGGCGTCACCAAAATCGCTTGGCAGCTGCTCGCAATTTTCCTGGCCACCATCGTCGGAATCATCACGCAGCCACTTCCACTCGGTGCGGTGGCGTTGTTAGGCCTCGGCGTATCGGTCCTCACCAAAACCCTAACGTTCGCGGCGGCGTTCTCCGGTTTCGGCGATCCCATCCCCTGGCTCATCTGCTTCGCTTTCTTCTTCGCCAAAGGATTCATCAAAACCGGTCTCGGAAACCGCGTCGGTTACCAGTTCGTCTCCCTCTTCGGTAGCTCCACGCTAGGGTTAGGTTACAGCCTGGTGTTCAGCGAGGCCTTGCTTGCGCCGGCGATTCCGTCGGTTTCAGCGAGAGCCGGAGGTATCTTCCTGCCGCTGGTGAAGTCTCTGTGCGCCGCGTGCGGGAGCAACCCCGGCGACGGAACGGAGAGGAAGCTCGGAGCGTGGTTGTCGCTGACGTGTTTTCAAACGTCGGTAATATCTTCGGCTATGTTCCTGACGGCGATGGCGGCGAACCCTCTGTGCGCAACTCTGACTCAGACCTCAATCAACCAAACGATTGGTTGGTTAGACTGGGCCAGAGCCGCCATTGTTCCCGGATTGGTGTCGTTGGTGGTAGTTCCCTTGTTACTATACATCGTTTACCCTCCAACTCTGAAATCAAGCCCCGATGCTCCGAAGCTTGCTCGTGAGAAGTTGCAGAACATGGGTCCTATGTCCTCTAATGAGAAGATTATGACTGCTACCTTGCTTCTTACGGTGGGACTTTGGGTGTTTGGAGGGGTTCTTAACATAGATGCTGTAACTGCTGCGATTCTTGGATTAGCTGTACTTCTTGTTACAGGGGTTGTTACATGGAAAGAGTGCTTAGGAGAGGGTGTTGCATGGGATACTCTCACATGGTTTGCTGCTCTCATTGCAATGGCTGCTTACTTGAACAAATACGGTCTCATTGCTTGGTTCAGCCAAACTGTAGTCAAGTTTGTGGGAGGATTAGGTCTATCATGGCAACTGTCATTTGGGATTCTAGTGCTCTTGTATTTCTACTCACATTACTTCTTTGCAAGTGGAGCTGCTCATATTGGTGCCATGTTCACTGCCTTCCTCTCTGTTGCCACTGCCCTGGGAACTCCACCCTTCTTTGGAGCCATGGTGCTGTCATTCCTGTCCAACCTCATGGGTGGTCTTACCCACTATGGAATTGGCTCAGCTCCTGTGTTCTATGGAGCTAACTATGTTCCTCTTGCTCAATGGTGGGGCTATGGCTTCCTTGTGAGTGTTGTTAACATTCTTATCTGGCTGGGTCTTGGTGGTGTTTGGTGGAAAGCCATTGGCTTGTGGTAA 1665 0.5261 MASSVALTTAFSTLPSLRQRPHSNHLTPSLSYPPKRRRFTPSLQHSFNVNTKHNWSPKKLSNVSSLVRASAAGASVTPAPAPAWQGAAIKPLLASIATGAIIWFAPVPNGVTKIAWQLLAIFLATIVGIITQPLPLGAVALLGLGVSVLTKTLTFAAAFSGFGDPIPWLICFAFFFAKGFIKTGLGNRVGYQFVSLFGSSTLGLGYSLVFSEALLAPAIPSVSARAGGIFLPLVKSLCAACGSNPGDGTERKLGAWLSLTCFQTSVISSAMFLTAMAANPLCATLTQTSINQTIGWLDWARAAIVPGLVSLVVVPLLLYIVYPPTLKSSPDAPKLAREKLQNMGPMSSNEKIMTATLLLTVGLWVFGGVLNIDAVTAAILGLAVLLVTGVVTWKECLGEGVAWDTLTWFAALIAMAAYLNKYGLIAWFSQTVVKFVGGLGLSWQLSFGILVLLYFYSHYFFASGAAHIGAMFTAFLSVATALGTPPFFGAMVLSFLSNLMGGLTHYGIGSAPVFYGANYVPLAQWWGYGFLVSVVNILIWLGLGGVWWKAIGLW 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30226g00047 554 CDD ArsB_NhaD_permease 126 548 - -
Stsc30226g00047 554 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 45 554 IPR030676 -
Stsc30226g00047 554 Pfam Sodium:sulfate symporter transmembrane region 91 554 IPR001898 GO:0016020|GO:0022857|GO:0055085
Stsc30226g00047 554 NCBIfam DASS family sodium-coupled anion symporter 106 548 IPR001898 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30226g00047 Stsc-Chr30226 210205 212975 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30226g00047 76 553 Antiporters AT5G12860 85.356 0.0 812
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30226g00047 - - gmx:100793559 847.425