Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30226g00023 ATGGCTTCTTCTGCTTCTGCAAGAGCCATGTTCCTTCTTCTGTGTCTCTTATTAGCTTCTCTCCTTCACCCAATCAATGCTCATGGTGATGATGGTGGCTCTGATTATCAAGGGAGCGTGAATTTGCACAACAAGGGATTGATCTTGGTGAAGATATGGTGTTTGATCATCATGCTTGTGAGCACCTTCGCCGGCGGCGTCTCTCCTTACTTCTTAAAATGGAACGAAACCTTTCTTCTTCTTGGGACACAGTTTGCAGGTGGTGTCTTCCTTGGAACTTCAATGATCCATTTCCTTAGCGATTCCAATGAGACATTCAAGGATCTCACCACTAAAACTTACCCGTTCTCCTTCATGCTCGCGTGCTTCGGCTACCTTCTGACTATGTTTGGTGACTGCGTGGTTATGCATGTCACCAGCAATAGTCAGAAGGTAGGGAAGATCACTGAGGTTGAAGAAGAACAGCAGCAACCACAGCATGAACAAGAGGAGGATCATCAACAACACCACAGAGATGTAACATTCATGGCCACACATAACCCTATTTTTGTGAAGACATCATCTCTTGGGGACACCATTCTCCTTATTTCTGCCTTGTGCTTCCATTCTGTTTTTGAGGGCATTGCTGTTGGAGTCTCAGGTACTAAGTATGATGCATGGAGGAACTTGTGGACAATATCATTGCACAAGGTATTTGCTGCCATTGCAATGGGAATAGCATTGCTTAGGTTGTTACCAAAGAGGCCTTTAGTTGCAACAGTGGCATATTCATTAGCATTTGCAATATCTAGTCCCCTTGGGGTTGGAATTGGGATTGCCATAGATGCCACTACACAAGGATCAACTGCGGATTGGATTTATGCTATATCAATGGGAATTGCTTGTGGTCTTTTCATCTATGTTGCTATCAATCATTTGATATCCAAAGGGTTCAAGCCACAGAAGCCAAACCGGTTTGACACCTCTTGGTTTAGGTTTCTAGCTGTGCTTCTTGGAGTAGCTCTTATTGCTGTCGTCATGATATGGGACTGA 1032 0.4419 MASSASARAMFLLLCLLLASLLHPINAHGDDGGSDYQGSVNLHNKGLILVKIWCLIIMLVSTFAGGVSPYFLKWNETFLLLGTQFAGGVFLGTSMIHFLSDSNETFKDLTTKTYPFSFMLACFGYLLTMFGDCVVMHVTSNSQKVGKITEVEEEQQQPQHEQEEDHQQHHRDVTFMATHNPIFVKTSSLGDTILLISALCFHSVFEGIAVGVSGTKYDAWRNLWTISLHKVFAAIAMGIALLRLLPKRPLVATVAYSLAFAISSPLGVGIGIAIDATTQGSTADWIYAISMGIACGLFIYVAINHLISKGFKPQKPNRFDTSWFRFLAVLLGVALIAVVMIWD 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30226g00023 343 Pfam ZIP Zinc transporter 49 339 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Stsc30226g00023 343 PANTHER ZINC/IRON TRANSPORTER 50 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30226g00023 Stsc-Chr30226 113033 114471 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30226g00023 24 343 Inorganic Solute Cotransporters AT1G55910 53.453 3.75e-124 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30226g00023 K14709 - gmx:100788541 473.396