Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30226g00012 ATGCTTTCTACCAACCCTTTTCTAGAAAATTTCCCTGGTCATGTCTCACTGTTCTCTAACCAGGAACCAATCATGAATGGTTTTCAGTATGAGGGTTCATCATCTTCACCTTCACCTTCTTCTGGAACCAGCTCAAGTGGAGACACAACTGACTCAAACCCCATCCTCAGATACATAAGTGATATCCTCATGGATGAGGAAGATGACTTGGAGAACAAACCCTGTATGTTGCAGCAGTGTTTGAAGCTCCAAGCTGCTGAGAAATCATTCTATGAAGTTCTTGGAAATTCATCATCATATTCCCCACCCTCTCAAGGTTGTGATGAAACCAACCAAGATGGTGGTGATTATGGTCGCAGCACAAGCTTTGAGAGCTATAGCAGCTGCACAACTGATAACAACTCTTATGATTCCGATTGGGTCAATCTTGTTGGCGAGTATGAATCTTCTTTGCTACAAGCCACCTTGCTTGATTCCCCAAATGATGGATCTTCTTCTGGAATTAACTACCAGAACATGGTGCCATTGAACAACAAGAGAAGCCTTCAGGTTGATGATGAGACTTCATATGAAGAAGGTCAAAGAGGAAGCAAGATCTCAGCTGTTTTCGCTGACGAGTCAGAGCCACCAGAGATTCTTGATGAAGTGCTGCGTGTTCAGATTGGAAGAACTCAAGAATGTTGTGGTATTGAACGGTTACCAGAGAATGAGATGCCTAAGAAGCAGAACCTTGACTCAGTTGGATCCAATGGAAAGACAGGAGGGCGTTCAAAGAAAGGGAGCAACAGCAATAGCAACCCAGGTGCAGCTGTGGATCTATGGACTCTGCTAACTCAATGTGCACAAGCAGTGGCAAACTATGATCAGAGGAATGCATATGATACACTCAAGCAGATTAGGCAACATTCTTCACCATCTGGGGATGGACTCCAGCGAATGGCCTATTACTTCGCCATTGGCCTCGAGACACGGTTGAATGCCGGAACACCCTCATATCTTCCCCTTGAGATGGCATCTGCTGCAGATATGTTGAAAGCTTACAAACTATTTGTTACAGTTTCGCCTTTGCAGAGGATGTCAAATAAAATGGGAACCTTAACAATCATGAACCTAGTGCAGAATGGAAGCTGTGTTCACATTATTGACTTTGGAATTTGCTACGGTTTCCAGTGGCCGTGCCTTATCAGGCGTCTGTCAGAGCGAAATGGGGCTATAAAGCTTCGGATAACTGGAATTGATCTTCCTCAGCCGGGTTTCCGGCCTGCAGAAAGGCTCGAGGAGACAGGTAGACGCTTGGAGAATTTCTGTAAGAGGCACAAGGTGCCTTTTGAATACAACTGCATTGCACAGAAATGGGAAACAATCAGGCTTGAGGATCTTAAGATAGACAGGAATGAAGTGACTGTTGTTAACTGTCTGTACAGGCTGAGAAACCTTCCGGATGAAACTGTGTCGGTGAACAGTCCAAGAGATGCAGTGTTGAAGCTGATCAGGAGGATTAATCCAAACATCTTCATCCATGGAGTAGTCAATGGCTCTTATAGCGCGCCGTTTTTCCTGACACGGTTCAGGGAGGCTCTCTTCAACTTCTCATCCCTGTTTGACATGTTCGAGGCTAATGCCCCACGCGAAGATGCAGAAAGGATGTTGCTCGAGAAAGGGTTGATTGGAAGGGATGCTATCAATGTGATAGCTTGCGAGGGAGCAGAGAGAGTTGAAAGGCCAGAGACCTACAAGCAATGGCAGATTAGAAACAAGAGAGCAGGGTTCAAGCAGATTCGGGTGGATCAAGAATTGGATGGGAAGTGGGTTTTGCAAGGCTGGAAAGGCCGTATTCTTAATGCTTTTTCTGTTTGGGTTCCTGCTTAA 1869 0.4537 MLSTNPFLENFPGHVSLFSNQEPIMNGFQYEGSSSSPSPSSGTSSSGDTTDSNPILRYISDILMDEEDDLENKPCMLQQCLKLQAAEKSFYEVLGNSSSYSPPSQGCDETNQDGGDYGRSTSFESYSSCTTDNNSYDSDWVNLVGEYESSLLQATLLDSPNDGSSSGINYQNMVPLNNKRSLQVDDETSYEEGQRGSKISAVFADESEPPEILDEVLRVQIGRTQECCGIERLPENEMPKKQNLDSVGSNGKTGGRSKKGSNSNSNPGAAVDLWTLLTQCAQAVANYDQRNAYDTLKQIRQHSSPSGDGLQRMAYYFAIGLETRLNAGTPSYLPLEMASAADMLKAYKLFVTVSPLQRMSNKMGTLTIMNLVQNGSCVHIIDFGICYGFQWPCLIRRLSERNGAIKLRITGIDLPQPGFRPAERLEETGRRLENFCKRHKVPFEYNCIAQKWETIRLEDLKIDRNEVTVVNCLYRLRNLPDETVSVNSPRDAVLKLIRRINPNIFIHGVVNGSYSAPFFLTRFREALFNFSSLFDMFEANAPREDAERMLLEKGLIGRDAINVIACEGAERVERPETYKQWQIRNKRAGFKQIRVDQELDGKWVLQGWKGRILNAFSVWVPA 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30226g00012 622 MobiDBLite consensus disorder prediction 26 53 - -
Stsc30226g00012 622 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 200 598 IPR005202 -
Stsc30226g00012 622 MobiDBLite consensus disorder prediction 230 266 - -
Stsc30226g00012 622 Pfam GRAS domain family 275 598 IPR005202 -
Stsc30226g00012 622 ProSiteProfiles GRAS family profile. 264 622 IPR005202 -
Stsc30226g00012 622 MobiDBLite consensus disorder prediction 242 266 - -
Stsc30226g00012 622 MobiDBLite consensus disorder prediction 97 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30226g00012 Stsc-Chr30226 75518 77696 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30226g00012 45 621 GRAS Transcription Factor Family AT2G29060 44.337 1.37e-160 473
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Stsc30226g00012 GRAS 9.8e-94 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30226g00012 - - aip:107612146 1005.74