Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30226g00011 ATGATTTCTAATATGGATCCCAATCAAGTTAGTATCAACGATTACATAAACCCCTACGGTTTCGGGGACGATGGTGGCGCTCTTCTTTCAGATTTCACCGATTGGGATCTACAGGGACAATACACGCTCCCCTTCGATTTTGATCCATTTGACGCCAATCCATTTGGTTTTCATGCAACTACGTTTCCCAATTCCGGAACCTCAGACCCGTTTCTTCCATCCTCTAGCGCAATCCATGTGGAAGACTCCATGCCTGCTTCTATGGCGGATCCTTCCATGGAAGACGCTGAGTTTTCGGAAACGGTGAGGTACATAAGCCAGATGTTAATGGAAGAGAATTTTGAAGATAAGGCATGCATGTGCTATAATCCAATTACCCTGAAAGACACTGAGAAATCCTTCCATGATGCTATCAACAATGAAGGATTACCCCTTTCCCCTAATCAGCACCCTCTTGATATTCATCATCACAATCTGGAGAGCCCTGACACCACTGGTTCTTCTGGAGATTGCAGCAATTGCAGTAGTAGTGAGAACCATCCATGTTCTCATGAATTCAACACTCTTTCTCCAGATACTCCTGTTTCAGGTGATAGTAGTGCTTTGCAGTGTGATTCACATTCGCATTGGTTTTTGAATGTGCCTTCTCAGCTTTCGCTTCCTCAGCATGCTTTGGATAGTATTGGTGATGGTGTGTTTGATTTGGATCCTTCTTCGACGAAGCTCTTGGCTCAGAACATCTTCAGTGATGCTGATTCTATGTTGCAGTTCAAAAGAGGGTTGGAGGAAGCTATCAAGTTTCTTCCCCCTGGGCCAAGGCTTTTCACTGGCCTAGAGAGCAGCAGCATGCATGCAGAAGAGCCAAAGAGAGAGGTGGAGAAGGCGGGGGTGCCAGTCAAGGTGGAGAATGGTGTTAAGGGGAAATCAAAAGCAGTTTTTGCTGAGCCTTACCACATGGTTCCAGCAACAACAAAAGCTGCAAAAGTTACAGCAGTGAGGAGTCTGGATGGAGTGAAGAGTAGGAAGCATCATGATCGCCAAGGTGATGATGGTGAAGAAGAAGGAAGATGCAACAAGCAATCTGCTGTTTGTGTTGAAGAGGAGAGTGAAATATCTGATATGTTTGACAAGGTGCTGCTTAGTGTTGAAAATGTGCCACTGTCTGCTGAACAGCAAGATGGATTGGTTGTGGAGTATCCACAACCAATTGAAGAACCACATTCATCTGAGGGAGGGAGGAGGCGATCCAAGAAAAAAGGCAAGAAGAAGAAAGAAACTGTGGATTTGAGAACTCTTTTGATCCTGTGTGCCCAAGCTGTGTCTGCCAATGACCAAAGGACTGCTAGGGAGCTACTAAAGCAGATCAGACAGCATTCATTGCCCCTCGGCGATGCATATCAGAGGCTAGCTCATTACTTCGCGGATGCCCTTGAGGCGCGCATGGCTGGAACTGGCCCTGGAACTCATATATTCTATGCCTTTCTTAGCTACAAGAAGTTCAGTGCTGCTGATTTTCTCAAGGCCTACCAAGTTTTTATATCTGCTTGCCCTTTCAAGAAATTTGCACATTTCTTTTCAAATAGAATGATTTTGAACACAGCTGAAAAGGCAGAAACTCTTCATATTATTGATTTTGGTATCCTGTATGGTTTCCAGTGGCCAATACTTATCAAATTTCTAGCGAAACGAGAAGGTGGGCCTCCGAAGCTGCGGATCACAGGAATAGAGTATCCCCAGGCTGGATTCCGTCCCACGGAAAGAATTGAGGAGAGTGGACGGCGTCTAGCTAAATATTGTCAGCAATTCAATGTTCCCTTTGAGTACAAAGCCATAGCTTCAAGACACTGGGAAACCATTCGGGTTGAAGACCTTAACATCAAGGCCAATGAGGTAGTTGCTGTTAACTGTCTGGTAAGGTTCAAGAATTTACTCGAGGAGACGGTCGAAGTGAACAGTCCTAGAAATGCAGTTTTGAACTTAATCAAGAGGATAAATCCAGCTATTTTTACTCAGGCAGTTGTAAATGGTTCTTATAATGCTCCATTCTTCCTCACACGCTTTAGGGAGGCACTGTTCCATTACTCTGCAATTTATGATATGTTTGATACTCTCATACCCCGAAACAACGGCTGGAGGGCGATGCTAGAGAGGGAGTTTTTGGGTCGGGAGATTATGAATGTTGTAGCATGTGAAGGTCTAGAAAGAGTTGAGAGGCCTGAAACATACAAGCAGTGGCAGGCTAGGATTACAAGGGCTGGTTTTAGGCAGCTACCGCCCGATAAGGAGATAATGACCAAATTTAGGACCAAGTTACAGGAATGGTACCATCACCACAAAGATTTTGTTTTTGATGAAGACAACAACTGGATGCTTCAAGGTTGGAAGGGAAGGATTTTGTACGCCTCCTCTTGTTGGGTGCCGGTGTGA 2427 0.4491 MISNMDPNQVSINDYINPYGFGDDGGALLSDFTDWDLQGQYTLPFDFDPFDANPFGFHATTFPNSGTSDPFLPSSSAIHVEDSMPASMADPSMEDAEFSETVRYISQMLMEENFEDKACMCYNPITLKDTEKSFHDAINNEGLPLSPNQHPLDIHHHNLESPDTTGSSGDCSNCSSSENHPCSHEFNTLSPDTPVSGDSSALQCDSHSHWFLNVPSQLSLPQHALDSIGDGVFDLDPSSTKLLAQNIFSDADSMLQFKRGLEEAIKFLPPGPRLFTGLESSSMHAEEPKREVEKAGVPVKVENGVKGKSKAVFAEPYHMVPATTKAAKVTAVRSLDGVKSRKHHDRQGDDGEEEGRCNKQSAVCVEEESEISDMFDKVLLSVENVPLSAEQQDGLVVEYPQPIEEPHSSEGGRRRSKKKGKKKKETVDLRTLLILCAQAVSANDQRTARELLKQIRQHSLPLGDAYQRLAHYFADALEARMAGTGPGTHIFYAFLSYKKFSAADFLKAYQVFISACPFKKFAHFFSNRMILNTAEKAETLHIIDFGILYGFQWPILIKFLAKREGGPPKLRITGIEYPQAGFRPTERIEESGRRLAKYCQQFNVPFEYKAIASRHWETIRVEDLNIKANEVVAVNCLVRFKNLLEETVEVNSPRNAVLNLIKRINPAIFTQAVVNGSYNAPFFLTRFREALFHYSAIYDMFDTLIPRNNGWRAMLEREFLGREIMNVVACEGLERVERPETYKQWQARITRAGFRQLPPDKEIMTKFRTKLQEWYHHHKDFVFDEDNNWMLQGWKGRILYASSCWVPV 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30226g00011 808 MobiDBLite consensus disorder prediction 334 361 - -
Stsc30226g00011 808 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 361 801 IPR005202 -
Stsc30226g00011 808 MobiDBLite consensus disorder prediction 141 174 - -
Stsc30226g00011 808 MobiDBLite consensus disorder prediction 335 361 - -
Stsc30226g00011 808 MobiDBLite consensus disorder prediction 399 424 - -
Stsc30226g00011 808 ProSiteProfiles GRAS family profile. 420 806 IPR005202 -
Stsc30226g00011 808 Pfam GRAS domain family 429 805 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30226g00011 Stsc-Chr30226 67838 71006 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30226g00011 101 807 GRAS Transcription Factor Family AT1G07530 47.067 0.0 588
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Stsc30226g00011 GRAS 1.5e-116 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30226g00011 - - adu:107461599 1292.72