Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30225g00054 ATGGCTGATTTTGGTACCTATACCCTATTATTTCTCATTTGGCTAGCCTCAACCCTGTTTCTAAGACTAATCTTCACAAAACTTGGCATTATCATAAATAGGCCACAACACCTTCCACCAAGCCCTAGAGCCCTTCCAATAATAGGACACCTCTACCTTCTAACAAAGCTCCCTCACCAATCATTTCACAAGATCTCAACACGTTATGGCCCTTTGGTATATCTCTTGTTTGGTTCAAAGCCTTGTGTCCTTGTTTCTTCACCTGAAATGGCAAGGCAATGCCTCAAGACCCATGAAACATGCTTCTTGAACAGACCCAAGAGGAGTAACCTTGATTACATCACTTATGGTTCCTCTGATTTTGCGTTGGCACCTTATGGACCTTATTGGAGGTTCATGAAGAAGCTTTGTATGACTCAACTCCTTGGTGGCCGTATACTCCATCAGCACTTTCCCATTAGAGCTGAGGAGATAAGGCTATTCTTGAAGGGTATGATGAAAAAGGCTGAGTTGAGAGAAGAGGTGAATGTTGGGTCAGAGCTAGC 545 0.433 MADFGTYTLLFLIWLASTLFLRLIFTKLGIIINRPQHLPPSPRALPIIGHLYLLTKLPHQSFHKISTRYGPLVYLLFGSKPCVLVSSPEMARQCLKTHETCFLNRPKRSNLDYITYGSSDFALAPYGPYWRFMKKLCMTQLLGGRILHQHFPIRAEEIRLFLKGMMKKAELREEVNVGSELA 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30225g00054 182 PANTHER CYTOCHROME P450 93A3-LIKE 18 181 - -
Stsc30225g00054 182 Pfam Cytochrome P450 39 173 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30225g00054 182 Gene3D Cytochrome P450 31 182 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30225g00054 182 SUPERFAMILY Cytochrome P450 33 178 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30225g00054 Stsc-Chr30225 266003 267249 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30225g00054 1 181 Cytochrome P450 AT5G06900 47.253 2.39e-54 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30225g00054 K24188 - gmx:100807524 289.271