Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30225g00043 ATGCCTCGTCTAAGATTTCTTAAACTTCATAACTCTTCGGGTGAAAGATCATCAGATGTGTTTGTTCCTACAACTCTTGAGACAATTTCTGAAGAACTAAGGTATTTCGAATGGCATAAGTATCCTTTGAGTTCTATGCGGTTGGCATTTTTTGCTGAGAAGCTTATTGAGCTTCACATGCCAGGCAGTCAGGTTACTAAACTCTGGGATGGAGTTCAGGATCTTGTGAATTTAAAAAAAATTGGCCTTTCGAAATGCAAACAGTTGGTGGAACTTCCAGATCTTAGTAGGGCAGCAAATTTAGAGCAGATAGACATCTCCTATTGTGAAGCTTTGCGTCAACTTCACCCATCTATTATATCCATCCCCAAACTTGAACTTTTGGAACTTAACTACTGCAAAAAACTGAAGAGTTTTAAAGGGGAGATTCGTTCCAAGTCTCTTAGAAAACTCAATTTTAATGGTTGCTCAAGCCTAGAGGAATTTTCTGTGTCATCGGGCCAACTGAGTTCTTTGACTTTCAGATCCTCAGGAATTAGGAGTCTTGAAAATGAGCTATGCTGCCTTACATTTCTGGAAGAACTTGTTCTTAGTAATTGCAGAGAGCTAACGGAACTCCCTCATAATGCAAAAGCTTTATCAAGACTGCAGAGATTGACTGTAAGTGATTGCAGGAGTCTTCGATCTTCTATACCCGAACTTCCATCATCTATAAGAAACTATGTTTCTCATTGTGCATCACTGGAAACAATATTCAGTTTAAATTCAGGATCCGATTTGAGAAAGATCTCATTTTTGAATTGCATGAGATTGGATGAAGAGTCACGGAATAATATCATGGAAGGAGTCCATCTCACAATATTTAAAAAGATACTGTTGATGTCGCTAGGACTAGGAGATGGTCATTTGTGGGATTCTGCTGTTGAAATTCAATCCCAGTTCAGTTGTGATGTTTGTTATTCAGGGAGCAAGTTGGCAGAGTTGTTCAGATGTCGAACAACAGAAGGAGCTTCCATAAAAGCTAAAATAGATGAACCTTACGACCAGTTGTTGGGTTTCTATGTGTCATGTGCTGTTTCTCAAGAGTTCTCTCCTTATTCCAGTGTCTATTGTGAATACGACTTGGGAGATGGTGAAAGATATCCACTTGGAACTTATTATCTAACTTATTATCCAAATGAGCTACGTCAAAGATGGGGAACTGATCATATTTGTGTATGGTTCCATCCATTTTATACTAGCCGAATAAAGAAGGCTATTGAAACGTGCGTATGCAGTGATGATCATGGTACCACTTGGAACAAAACCATTTTATTCACATTCACTGCTGAAGGATGTGCATCTAGAGTGGACGATTTCTTTATGAAATCCTGTGGAGTTTTACCAATATATGCCTCGGATGTCCTCCAACTCATTCCAAAACTAGAATTGGAGTTGAAGGGTCTTCATCAAGATTTGGATCTTGATGCACTGAAAAGTAAGCTCATTTGGAAGATATCCAATAGTAGCAGTGACCAGGAGGAGGAGGAGGATGAAAAAGAAGAAAAGAAAGAAAGAAAGTTACCTCATAAAAGGTACTACTGCCTCCCTCCAATTTACGCAATCATTCTTATATTCTCTGTTTACAAACTGCAACATACTGAGTTAAGAAAAAAATTGCCAGCACAATGA 1671 0.386 MPRLRFLKLHNSSGERSSDVFVPTTLETISEELRYFEWHKYPLSSMRLAFFAEKLIELHMPGSQVTKLWDGVQDLVNLKKIGLSKCKQLVELPDLSRAANLEQIDISYCEALRQLHPSIISIPKLELLELNYCKKLKSFKGEIRSKSLRKLNFNGCSSLEEFSVSSGQLSSLTFRSSGIRSLENELCCLTFLEELVLSNCRELTELPHNAKALSRLQRLTVSDCRSLRSSIPELPSSIRNYVSHCASLETIFSLNSGSDLRKISFLNCMRLDEESRNNIMEGVHLTIFKKILLMSLGLGDGHLWDSAVEIQSQFSCDVCYSGSKLAELFRCRTTEGASIKAKIDEPYDQLLGFYVSCAVSQEFSPYSSVYCEYDLGDGERYPLGTYYLTYYPNELRQRWGTDHICVWFHPFYTSRIKKAIETCVCSDDHGTTWNKTILFTFTAEGCASRVDDFFMKSCGVLPIYASDVLQLIPKLELELKGLHQDLDLDALKSKLIWKISNSSSDQEEEEDEKEEKKERKLPHKRYYCLPPIYAIILIFSVYKLQHTELRKKLPAQ 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30225g00043 556 Gene3D Ribonuclease Inhibitor 1 144 IPR032675 -
Stsc30225g00043 556 Coils Coil 499 519 - -
Stsc30225g00043 556 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 165 IPR044974 GO:0006952
Stsc30225g00043 556 SUPERFAMILY L domain-like 2 270 - -
Stsc30225g00043 556 Gene3D Ribonuclease Inhibitor 145 281 IPR032675 -
Stsc30225g00043 556 Pfam Leucine Rich Repeat 54 73 IPR011713 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30225g00043 Stsc-Chr30225 204727 206489 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30225g00043 1 238 WRKY Transcription Factor Family AT4G12020 36.604 1.05e-31 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30225g00043 - - ahf:112728390 518.464