Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc30225g00040 | ATGGATGGCTTCCTCAATCTTAATGCTATTTCTTCAAGTCTTGCTTTTTTCATTTCAACTCTCATCTCCTTTGAAAATGGTTCTTTGGCAGATAATCTCTCATCCAATACGCTTGATTGGAGCAAAAGGTATAACATCGCTCTCGGAACAGCAAGAGGTTTGGCATATCTACATGAAGAATGTTTGGAATGGATTTTGCACTGTGATATAAAACCTCAAAATATTCTCTTGGATTCAGATTATCAACCCAAGGTTGCAGATTTCGGATTGTCCAAGTTATTGAACAGAGATGATCTCAACAACACTCCAAATTTCTCAATGATAAGAGGAACCAGAGGAGTGGCTTTGGATTGCATAGAAGAAGACAAAGAAGGAAGGCCTACCATGAAACAAGTGGTTGAAATGCTCCAAAGCCACGCCTGGGATCCTAATGGTGGAGCATAA | 444 | 0.3964 | MDGFLNLNAISSSLAFFISTLISFENGSLADNLSSNTLDWSKRYNIALGTARGLAYLHEECLEWILHCDIKPQNILLDSDYQPKVADFGLSKLLNRDDLNNTPNFSMIRGTRGVALDCIEEDKEGRPTMKQVVEMLQSHAWDPNGGA | 147 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc30225g00040 | 147 | SUPERFAMILY | Protein kinase-like (PK-like) | 25 | 136 | IPR011009 | - | |
Stsc30225g00040 | 147 | PANTHER | OS07G0415500 PROTEIN | 25 | 113 | - | - | |
Stsc30225g00040 | 147 | Pfam | Protein kinase domain | 25 | 99 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc30225g00040 | 147 | Gene3D | Transferase(Phosphotransferase) domain 1 | 24 | 115 | - | - | |
Stsc30225g00040 | 147 | ProSiteProfiles | Protein kinase domain profile. | 1 | 147 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc30225g00040 | 147 | FunFam | Protein kinase superfamily protein | 24 | 93 | - | - | |
Stsc30225g00040 | 147 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 65 | 77 | IPR008271 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc30225g00040 | Stsc-Chr30225 | 182812 | 183546 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc30225g00040 | 4 | 113 | Receptor kinase-like Gene Family | AT1G60800 | 46.087 | 5.22e-23 | 92.0 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_SD-2b | Stsc30225g00040 | Pkinase | 1.8e-16 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc30225g00040 | - | - | aip:107625486 | 176.792 |