Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30225g00040 ATGGATGGCTTCCTCAATCTTAATGCTATTTCTTCAAGTCTTGCTTTTTTCATTTCAACTCTCATCTCCTTTGAAAATGGTTCTTTGGCAGATAATCTCTCATCCAATACGCTTGATTGGAGCAAAAGGTATAACATCGCTCTCGGAACAGCAAGAGGTTTGGCATATCTACATGAAGAATGTTTGGAATGGATTTTGCACTGTGATATAAAACCTCAAAATATTCTCTTGGATTCAGATTATCAACCCAAGGTTGCAGATTTCGGATTGTCCAAGTTATTGAACAGAGATGATCTCAACAACACTCCAAATTTCTCAATGATAAGAGGAACCAGAGGAGTGGCTTTGGATTGCATAGAAGAAGACAAAGAAGGAAGGCCTACCATGAAACAAGTGGTTGAAATGCTCCAAAGCCACGCCTGGGATCCTAATGGTGGAGCATAA 444 0.3964 MDGFLNLNAISSSLAFFISTLISFENGSLADNLSSNTLDWSKRYNIALGTARGLAYLHEECLEWILHCDIKPQNILLDSDYQPKVADFGLSKLLNRDDLNNTPNFSMIRGTRGVALDCIEEDKEGRPTMKQVVEMLQSHAWDPNGGA 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30225g00040 147 SUPERFAMILY Protein kinase-like (PK-like) 25 136 IPR011009 -
Stsc30225g00040 147 PANTHER OS07G0415500 PROTEIN 25 113 - -
Stsc30225g00040 147 Pfam Protein kinase domain 25 99 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30225g00040 147 Gene3D Transferase(Phosphotransferase) domain 1 24 115 - -
Stsc30225g00040 147 ProSiteProfiles Protein kinase domain profile. 1 147 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30225g00040 147 FunFam Protein kinase superfamily protein 24 93 - -
Stsc30225g00040 147 ProSitePatterns Serine/Threonine protein kinases active-site signature. 65 77 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30225g00040 Stsc-Chr30225 182812 183546 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30225g00040 4 113 Receptor kinase-like Gene Family AT1G60800 46.087 5.22e-23 92.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Stsc30225g00040 Pkinase 1.8e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30225g00040 - - aip:107625486 176.792