Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30225g00038 ATGTCTGCAAAACTTGAAGGCAGAGCTTTACTCTCTTCCTTTATTGATTCTGCTTTGATGAAGCTGTCTACTGTCAACTCAATCCCTGCCAGGAAGCCAGATGAACAGAAGTTGCTTCGGAGGCTGAGGGCAAATCTACGTGCTGTTCGACCTTTTCTTGATGATGCTGAGCAGAAGCAGTTCAAAGACCCTGAAGTCAAGACCTGGCTTGTTAATCTCCAAGATGCTCTCTATATGGCTGATGACTTGCTCGATGAACTCTCCACTAAAGCTGTTGTTGCCTCTCTCACTCAAACGGATCCAGGTACTTCTTCTTCTTCCTGGTCTCATTATGTTGATGATATCTTGGAAGTTAGTAATTATGAGATGGAGGACTTAGTTGTTACACTGGAGTCTCTTGTTGAAGAGAAAGATGAGTTTCCTCTTGAAAAGGCTGCAAATAAAGATCTAGAGGACCTGTCATGGAGAAATGAGACCACATCTCTGCTTGAAGGTTCTGAAATTTATGGCCGGGACGAAGAGAAAGAGGAGATAATAGGAATGCTGTTAGATGATACTTGTGATGGAAAACTTTCTGTTATCTCTATAGAAGGTATGGGGGGAGTTGGAAAAACCACTTTGGCTCAGCTGGTTTACCATGATGCCAGAGTGAAGGCAAAATTTGACATTAGAGCATGGGTTAGTGTTGCTACAAAATTTGATCCTGTTATGGTTACAAAAGCTGTAATACAGGAAGTAGATTCTTCTTCTCCTTGTCATAAGGTTAGCTTGAATTCACTTCAAACTGAATTGCAAGAAAAGTTGACAGGAAAGGCATTCTTAGTTGTTTTAGATGATGTTTGGGACAATCAACAAAATTTGTGGGACAATTTTCTAAAACCATTTTTGTATGGGAATAAAGGAAGTAAAATTCTGTTAACTACCCGTACAAAAAATGTTGATTCTGTGGTAGCTACTAATCTGCACCACACTCTATATACATTGTCTCACGAAAATTGTTGGTCCATATTTTTAAAACATTCATCTCTTTCTACTAATTCTAGTCAATGTACAAGTCTAGAATCAATTGGTAGCAAAATTGTGGAGAAGTGTAAGGGGTTACCTTTGGCCGTGAAGACCCTGGGGGGTTTATTACGAAACAAGTCTAATGAAAGGTACTGGAATGATATACTGGAAAGTAGAATTTGGGAACTTCCAGAAGATGAAAGCAAGATTGTCCCTGCATTAAGAATTAGTTATGACTCTCTCCCTTCACATTTAAAGAGGTGTTTTGTTTATTGTTCATTATATCCCGAGGATTATCAATTTGACAAAGACGAGTTAATTTCATTGTGGATGGCTGAAGATATGTTACAACCAATGGGAAAAAGAACGTTAGAAGAAATTGGTTGTGCATATTTTAATGAATTAGTTGCACGATCATTTTTCCAACCTTCCAGTTCTAATCGTAGCTTATTTGTAATGCATGATCTCATGCATGATCTAGCTACATTTTTTGCTGGGAAATTCTATTTCAGAGTCAAAGAATTAGACAATCCACTTAAGATTGACATTAAAACTCGTCATTTGTCATGTATTGTAAATCGTGTGTGTCCAATTTCAAAACTTCTTGAAGCTTGCAATGAAAATATGAGAACTTTTCTTATACCTGCTGTCAAGTCTGATATCTTGAATGAATATTTTGAGATGGAAAACAATTCTTGTCTCTTCCTACTACAGTTGAAATATTTGAGAGCTCTATCATTCAAATGTTTTCCTCTCAATGCACTACCTGAGTCAATAGATGGATTGATCCATTTGCATTATCTAGATCTCTCTTTTACACCTATTGTAAGATTGTCCGAGTCATTGTGTAACTTGTACAATTTACAAACGTTGAAGCTGAGGCATTGTTATTGCCTCGAGATGCTTCCCGAAAAGATGCAAGATCTTGTGAACTTGCGGTATCTTGACATTCATGGAGCTTCTAGTCTAAAAGAGATGTGTAGAGGAATGAGCAAATTAAAAAATTTGAACTTCTTAAGTGACTATATTGTTGGTGAGCACGATGAGAATGGGATTAGAGAATTGGCAGCACTTGAAAATCTCCGTGGGTCATTTCGCATTTCCAAGTTACAGAATGTGAAAAATAGTGGTGAAGCTTTGGAAGCGAAGATAAGTGACAAGAAGCACATCGACATTTTATTACTGTTTTGGGGTGATGAGGGCAGTGTTGATGATCAAACTTCAAGAGATATACTGGACAAGTTACAACCTCATGCAGAGCTGAAAGAGCTATCAGTTACGGGATATAGGGGTAAAAAATTTCCAGATTGGTTAGGCTTTTCCTCCTACCGCAGCATGACCAAACTGGAGCTGAGTTATTGTAAGAATTGTTCTGAGCTTCCTTGTCTTGGACAGTTACCCTCTCTCAAGCATTTGAATCTTTTTAATCTTGATGGGTTGGAGAGAATAGGTTGCGAGTTTTACAAGAGTAATAAATCATTTGAGCAGGAGACGCCCTTCAAATCTCTTGAAAGTCTGACATTTCGGTACATGAGTTGTTGGGAGGAGTGGCATTTTCCCGATGAGTTTGATGGTTTTCCTCAACTTAAGAGGCTTTCAATACATGACTGTGATGTGTTAACAGGAAATTTACCCGGATACCTTCCCGCCCTGGAAAAACTCATCATTGAAGGATGCGAAGAGCTTGCATGTTCACTGCCGAGAGCCCCCAAGCTTCACGAATTAAAAGTATCCGGGGAAATGAGAATGGAGGAGGCACCTGAGTCACTGCGCGAGATAACCATTGATAAATCCGCGCTGGCGACGTCTGTATTGGAGTGTGTGGCCCACACCCAACCACCTCATCTCCAATGTATTGTGATCAGTAATTGTTCGCCTGACATATCAATTTCATGGGATCATTTGCCAGCTTCATTACAAGAGCTGAATATCTGGTGTTGTTCAAATTTAACATTCTCAGGACAAATGCGACATTCGATAAAGGAGATATGTATATCTGATTGTGGTTCTCTGAAGTTGTTCCCCTTGGTAGCCCTTCCAAAGCTTGAGAAACTCCAAATCTATGCATGTAGAAACCTGGAATGCATTGAGGTGCCACAGGATCATGATGACCATGTTCTTCCAAGTCTCCGTGAGTTATCGATCCTTTTCTGCCCCCTTTTGGTATCCATCTCCACTCTAGTTTTGGCTGCTCCCCACCTAGAAGAACTGACAATAACCTGTTGCTCAAGAATCGATTCTTTTCTGGAGGGGGGCCTCCCGCCTAGCTTGAGAGTGCTTGATATCAATTACTGCCCGAAACTAACAAGGTCGATAATATTGGGGGGTTTGCACGATGAAGGCCTTACCAGACTTAGCCTTTCTGGATGCTATAAAGTAAAGTCATTTCCAAGAGAGGGTTGCCTTCCTACTTCCCTTGAGTCTCTGCGAATCAGGAAATTTCGGCATCTGGAGACACTAGACTGCAAGGCGCTTCTCCATCTCACCTCCCTCAGAAAATTAAACATTTGGCAATGTTGGAATCTGAGGAATATGACAGAAGAAAGTCTGCCTGCCTCCATAACAAAACTCACCATCTCGGAATGTCCTTTGAGGTCTAAGCTGAAAGAGATGAACAATCCACTGATTAACTCCGAAGATGAATATTACTCCGTCTCAGAGGATTCAGAATCAGAATCAGAGGATGAGTAG 3696 0.4023 MSAKLEGRALLSSFIDSALMKLSTVNSIPARKPDEQKLLRRLRANLRAVRPFLDDAEQKQFKDPEVKTWLVNLQDALYMADDLLDELSTKAVVASLTQTDPGTSSSSWSHYVDDILEVSNYEMEDLVVTLESLVEEKDEFPLEKAANKDLEDLSWRNETTSLLEGSEIYGRDEEKEEIIGMLLDDTCDGKLSVISIEGMGGVGKTTLAQLVYHDARVKAKFDIRAWVSVATKFDPVMVTKAVIQEVDSSSPCHKVSLNSLQTELQEKLTGKAFLVVLDDVWDNQQNLWDNFLKPFLYGNKGSKILLTTRTKNVDSVVATNLHHTLYTLSHENCWSIFLKHSSLSTNSSQCTSLESIGSKIVEKCKGLPLAVKTLGGLLRNKSNERYWNDILESRIWELPEDESKIVPALRISYDSLPSHLKRCFVYCSLYPEDYQFDKDELISLWMAEDMLQPMGKRTLEEIGCAYFNELVARSFFQPSSSNRSLFVMHDLMHDLATFFAGKFYFRVKELDNPLKIDIKTRHLSCIVNRVCPISKLLEACNENMRTFLIPAVKSDILNEYFEMENNSCLFLLQLKYLRALSFKCFPLNALPESIDGLIHLHYLDLSFTPIVRLSESLCNLYNLQTLKLRHCYCLEMLPEKMQDLVNLRYLDIHGASSLKEMCRGMSKLKNLNFLSDYIVGEHDENGIRELAALENLRGSFRISKLQNVKNSGEALEAKISDKKHIDILLLFWGDEGSVDDQTSRDILDKLQPHAELKELSVTGYRGKKFPDWLGFSSYRSMTKLELSYCKNCSELPCLGQLPSLKHLNLFNLDGLERIGCEFYKSNKSFEQETPFKSLESLTFRYMSCWEEWHFPDEFDGFPQLKRLSIHDCDVLTGNLPGYLPALEKLIIEGCEELACSLPRAPKLHELKVSGEMRMEEAPESLREITIDKSALATSVLECVAHTQPPHLQCIVISNCSPDISISWDHLPASLQELNIWCCSNLTFSGQMRHSIKEICISDCGSLKLFPLVALPKLEKLQIYACRNLECIEVPQDHDDHVLPSLRELSILFCPLLVSISTLVLAAPHLEELTITCCSRIDSFLEGGLPPSLRVLDINYCPKLTRSIILGGLHDEGLTRLSLSGCYKVKSFPREGCLPTSLESLRIRKFRHLETLDCKALLHLTSLRKLNIWQCWNLRNMTEESLPASITKLTISECPLRSKLKEMNNPLINSEDEYYSVSEDSESESEDE 1231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30225g00038 1231 Gene3D - 407 497 IPR036388 -
Stsc30225g00038 1231 Pfam NB-ARC domain 172 414 IPR002182 GO:0043531
Stsc30225g00038 1231 PRINTS Disease resistance protein signature 193 208 - -
Stsc30225g00038 1231 PRINTS Disease resistance protein signature 267 281 - -
Stsc30225g00038 1231 PRINTS Disease resistance protein signature 364 378 - -
Stsc30225g00038 1231 PRINTS Disease resistance protein signature 642 658 - -
Stsc30225g00038 1231 PANTHER DISEASE RESISTANCE PROTEIN RP 43 895 IPR044974 GO:0006952
Stsc30225g00038 1231 Gene3D - 155 322 IPR027417 -
Stsc30225g00038 1231 SUPERFAMILY L domain-like 487 902 - -
Stsc30225g00038 1231 FunFam Probable disease resistance protein At1g61300 154 321 - -
Stsc30225g00038 1231 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 427 IPR027417 -
Stsc30225g00038 1231 Pfam Rx N-terminal domain 26 92 IPR041118 -
Stsc30225g00038 1231 SUPERFAMILY RNI-like 851 1201 - -
Stsc30225g00038 1231 Gene3D Ribonuclease Inhibitor 558 938 IPR032675 -
Stsc30225g00038 1231 Gene3D Ribonuclease Inhibitor 1042 1209 IPR032675 -
Stsc30225g00038 1231 Gene3D - 34 121 - -
Stsc30225g00038 1231 FunFam Probable disease resistance protein At1g63360 413 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30225g00038 Stsc-Chr30225 172797 176740 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30225g00038 163 659 WRKY Transcription Factor Family AT5G45050 23.346 8.99e-11 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30225g00038 - - ahf:112708719 1231.08