Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30225g00037 ATGGCTACAAAACTTGAAGGAAGAGCTTTTCTGTCTTCCTTTGTTGATGCTGCTTTGAATAAGCTGTCTTCTGTCAACTCAATCCCTGCCAGGAAGCCAGATGAACAGAAGCTGCTTTGGAGGCTGAGGGCAACTCTACGTGCTGTTCGACCTTTTCTTGATGATGCTGAGCAGAAGCAGTTCAAAGACCATGAAGTCAAGACCTGGCTTGTTAATCTCCAACATGCTCTCTATATGGCTGATGACTTGCTGGATGAACTCTCGACCAAAGCTGCTGTTGCCGCTCTCACTCAGACGGACCCAGGTACTTCTTCTTCTTCTTCCTGGTCTCATTATGTTGATGATATCTTGGAAGATAGTAATTATGAGATGGAGGATATAGTTGTTACACTAGAGTCTCTTGTTGAAGAGAAAGATGAGTTTCCTCTAGAAAAGGCTGTAAAAGATCTAGAGAACATGTCATGGAGAAATGAGACCACATCTCTGCTTGAAGGTTCTGAAATTTATGGCAGGGACGAAGAGAAAGAGGAGATAATAGGAATGCTGCTAGATGATACTTGTGATGGAAAACTTTCTGTGATCTCTATAGAAGGTATGGGGGGAGTTGGAAAAACCACTTTGGCTCAGGTAGTTTACCATGATGCCAGAGTGAAGGCAAAATTTGATATTAGAGCATGGGTTTCTGTTGCTACCAAATTCAATCCTGTTAATGTCACAAAAGCTGTAATACAGGAAATCATGTCTTCTTCTTGTGACATGGTTAGTTTGAATTCACTTCAAACTGAATTGCAGAAAGAGTTGACAGGAAGGAAATTCTTAGTTGTTTTAGATGATATGTGGGAGAATCAACAAAATTTTTGGGACAATTTTTTAAAACCTTTTCTATGTGAGAATAAAGGAAGTAAAATTCTGGTAACAACCCGCAATAAAAATGTTGATTCTATGTTGTCAACCACTAATTTTCATCGCAACTTACATCCGTTGTCTTATGAATATTGCTGGTCAATGTTTTTGAAACATTCATCTCTTTCTACCAATGATAGTCAATATAAATCTCTAGAATCAATTGGTAGAAAAATTGTAGAGAAGTGTAAGGGGTTACCTTTGGCTGTGAAGACCTTGGGGGGGTTATTACGACATGAGTCTAATGAAACGTACTGGATTAATATACTTGAAAGTAGAATCTGGGAACTTCCAGAAGATGAAAGCAAGATTGTTCCTGCATTAAGAATTAGTTATGACTCTCTCCCTTCACATTTGAAGAGGTGTTTTGTTTATTGTTCATTATATCCTCAAGATTATGGATTTGACAAAGATGAGTTAATTTCATTGTGGATGGCTGAAGATATTTTACAACCAATGGGAAAAAGAACATCAGAAGAAATTGGTTGCTCATATTTTAATGAATTAGTTGCAAGATCATTTTTTCAACCTTCTAGTTATAATGGTAGCCTATTTGTAATGCATGATCTCATGCATGATCTAGCCACACTTTTTGCTGAAAAGTTCTATTTCAGAGTCAAAGAATTTAACAAACCACTCAACATTGACATCAAAACTCGTCATTTGTCATTTATTGTAAATCATGTGTTTCCAATTTCAAAACTTGTCGAAGCTTGCAGTGAAGTAGAGCATATGAGGACATTCCTTTTCCCTGTTGTTGAGCCTCCTTTCCTGGATAAATTTTTTGAGATGGAAAACAATTCTTGTCTCTCCCTGGTACACTTGAAATATTTGAGAGTTCTGTCATTTAAACATTTTCGTCTTGAATCATTACCCAAGTCAATAGGTGAATTGATCCATTTGCGTTATTTGGATCTTTCTTTTACACCTATTCTAAGATTGTCCGAGTCATTGTGTAAATTGTACAATTTACAAACGTTGAAGCTGACAGGTTGTGATCGCCTTGAGATGCTTCCCGAACAGATGCAAGATCTTGTTAACTTACGGTATCTTGACATTGATGGAACTTTTCATTTAAGAGAGATGTGTAAAGGAATGAGCAAATTAAAAAATTTGAACTTCTTAAGCAAGTATATTGTTGGTGACCAAGATGATAATGGGATTAGAGAATTGGCAACACTTGAAAATCTTCACGGGTCATTTCGCATTTCCGAGTTACATAATGTGAAAAATAGTGGTGAAGCTTTGGAAGCGAAGATAGGTGACAAGAAGCACATTGACATTTTAGTATTCGAATGGGATATAAATGTTGACCGTGTTGATGATCAAACTTCAAGAGATATACTTGACAAGTTACAACCTCATGGAGAGCTGAAAGAGCTATCAATTAAAGGTTATATGGGTGAAAAATTTCCGGATTGGTTAGGCCGTTCCTCTTACCGCAGCATGACCAAACTGGAGCTGAGTCATTGTAAGAATTGTTCTGAGCTTCCTTGTCTTGGACAGTTACCCTCTTTGAAGCATTTGAGATTTTATTTTCTTTTTGGGTTGGAGAGAATTGGTTGGGAGTTTTACAAGAACAATAAATCATTTCAGCAGGAGACGCCCTTCAAATCTCTTGAAAGTTTGACATTTGAAAACATGCGTTGTTGGAAGGAGTGGCATTTTCCCGATGAGTTTGATGGTTTTCCTCTACTTAGACGCCTTTCAATAGATTACTGTCCAGTGTTAACTGGAAATTTGCCCAGTCAACTTCCCACTCTTGAGGAACTTATCATTGATAGATGCCAAGAGCTTGCATGTTCACTGCCAAGAGCCCCCAGGCTTCACAAATTACAAGTAAATAGAGTCGGTGAAATGAGAATGGAGGAAGCACCACAGTCACTGCACAATATTAGGATTGAAAAAACCCCGCTGGCGAAATCAGTATTGGAGTGCATGGCCCGCACCCAACCACCCCATCTCCAATGTATTGAGATCAGAGAGTGTTGGGCTGACATATCAATTTCATGGGATCATTTGCCTGCTTCATTACAAGAGCTGAGTATCATTCGTTGTTCAAATTTAACATTCTCAGGGCAACTACAACACTTGCTAAAGGAGATATCTATATATAAATGTGATTCACTGAAGTTGTTCCCATTGGTAGCCCTTCCAAATCTTGAGAAACTCAAAATCGATGAATGTAGAAACCTGGAATGCATTGAGGTGCCACAGGATCATGATAAGGATGTTCTTCCAAGTCTCTGTTATTTATTGATCCGTTTATGCCCCCTTTTGGTATCCATCTCCACTCTAGTTTTGGCTGCACCCCACCTACAGAAACTGACTATAATACACTGCTCAGAAATCGATTCTTTTCCAGAGGTGGGCCTTCCGCCTAGCTTGACAGAACTTGATATCCGTCACTGCCAGAAACTAACAAGGTGGATAATATTGATGGGTTTGCACAGTGAAGGACTTACCAGACTTCTCCTTTCTAAATGTGATGAAGTAAAGTCATTTCCAGGAAAGGGTAGCCTTCCTACCTCCCTTGAGTCACTAGCAATCTGGGAATTTAAGGATCTGCAGACGCTAAACTGCAAGGCGCTTCTCCATCTCACCTCCCTCAAACAATTAGATATTTTTTACTGTGAGAGGCTGAGGAACATGACAGAAGAAAGGCTGCCTTCCTCCATAACACAACTCGCCATTTACGGCTGTCCTTTGAGGTCTAAGCTGAAACGGATGAACTATCCACTGATCTGA 3651 0.3909 MATKLEGRAFLSSFVDAALNKLSSVNSIPARKPDEQKLLWRLRATLRAVRPFLDDAEQKQFKDHEVKTWLVNLQHALYMADDLLDELSTKAAVAALTQTDPGTSSSSSWSHYVDDILEDSNYEMEDIVVTLESLVEEKDEFPLEKAVKDLENMSWRNETTSLLEGSEIYGRDEEKEEIIGMLLDDTCDGKLSVISIEGMGGVGKTTLAQVVYHDARVKAKFDIRAWVSVATKFNPVNVTKAVIQEIMSSSCDMVSLNSLQTELQKELTGRKFLVVLDDMWENQQNFWDNFLKPFLCENKGSKILVTTRNKNVDSMLSTTNFHRNLHPLSYEYCWSMFLKHSSLSTNDSQYKSLESIGRKIVEKCKGLPLAVKTLGGLLRHESNETYWINILESRIWELPEDESKIVPALRISYDSLPSHLKRCFVYCSLYPQDYGFDKDELISLWMAEDILQPMGKRTSEEIGCSYFNELVARSFFQPSSYNGSLFVMHDLMHDLATLFAEKFYFRVKEFNKPLNIDIKTRHLSFIVNHVFPISKLVEACSEVEHMRTFLFPVVEPPFLDKFFEMENNSCLSLVHLKYLRVLSFKHFRLESLPKSIGELIHLRYLDLSFTPILRLSESLCKLYNLQTLKLTGCDRLEMLPEQMQDLVNLRYLDIDGTFHLREMCKGMSKLKNLNFLSKYIVGDQDDNGIRELATLENLHGSFRISELHNVKNSGEALEAKIGDKKHIDILVFEWDINVDRVDDQTSRDILDKLQPHGELKELSIKGYMGEKFPDWLGRSSYRSMTKLELSHCKNCSELPCLGQLPSLKHLRFYFLFGLERIGWEFYKNNKSFQQETPFKSLESLTFENMRCWKEWHFPDEFDGFPLLRRLSIDYCPVLTGNLPSQLPTLEELIIDRCQELACSLPRAPRLHKLQVNRVGEMRMEEAPQSLHNIRIEKTPLAKSVLECMARTQPPHLQCIEIRECWADISISWDHLPASLQELSIIRCSNLTFSGQLQHLLKEISIYKCDSLKLFPLVALPNLEKLKIDECRNLECIEVPQDHDKDVLPSLCYLLIRLCPLLVSISTLVLAAPHLQKLTIIHCSEIDSFPEVGLPPSLTELDIRHCQKLTRWIILMGLHSEGLTRLLLSKCDEVKSFPGKGSLPTSLESLAIWEFKDLQTLNCKALLHLTSLKQLDIFYCERLRNMTEERLPSSITQLAIYGCPLRSKLKRMNYPLI 1216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30225g00037 1216 Gene3D - 407 498 IPR036388 -
Stsc30225g00037 1216 Gene3D - 34 119 - -
Stsc30225g00037 1216 Pfam Rx N-terminal domain 14 93 IPR041118 -
Stsc30225g00037 1216 FunFam Probable disease resistance protein At1g61300 153 320 - -
Stsc30225g00037 1216 Gene3D Ribonuclease Inhibitor 950 1213 IPR032675 -
Stsc30225g00037 1216 Gene3D - 152 321 IPR027417 -
Stsc30225g00037 1216 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 427 IPR027417 -
Stsc30225g00037 1216 FunFam Probable disease resistance protein At1g63360 413 498 - -
Stsc30225g00037 1216 Gene3D Ribonuclease Inhibitor 561 949 IPR032675 -
Stsc30225g00037 1216 Pfam NB-ARC domain 172 414 IPR002182 GO:0043531
Stsc30225g00037 1216 PANTHER DISEASE RESISTANCE PROTEIN RP 50 852 IPR044974 GO:0006952
Stsc30225g00037 1216 SUPERFAMILY L domain-like 953 1205 - -
Stsc30225g00037 1216 SUPERFAMILY L domain-like 487 986 - -
Stsc30225g00037 1216 PRINTS Disease resistance protein signature 620 636 - -
Stsc30225g00037 1216 PRINTS Disease resistance protein signature 193 208 - -
Stsc30225g00037 1216 PRINTS Disease resistance protein signature 266 280 - -
Stsc30225g00037 1216 PRINTS Disease resistance protein signature 364 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30225g00037 Stsc-Chr30225 161371 165021 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30225g00037 163 681 WRKY Transcription Factor Family AT5G45050 22.222 4.85e-11 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30225g00037 - - ahf:112709990 1222.61