Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30224g00009 ATGATGATGAAGTTGACAATATTTGTAGTATTGTTATTTATTCTTCCGTTGGCATCAGTGGCTCAACTAAAGGTTGGTTTCTATGCGCCTAACTGCCCAAGAGCTGAAGCCATTGTTCGCCAAGTTGTTCAAAAGCACTTCAACGCTGATAAGACCATCACCGGTGGCTTGCTTCGCTTGCACTTTCATGATTGCTTTGTTGATGGTTGTGATGCCTCCATACTAATAGACTCCAAGAAGGGAAACCAATCGGAGAAAGACGCCGGAGCAAATGGAACCGTGAGGGGTTTCGAGATCATCGACGAGGCCAAGAAGTTGCTAGAGAAGGCATGTCCTAACACAGTCTCATGCGCAGACATAATCACACTCGCCACAAGAGACTCCGTCGACATGGCCGGAGGCCCAAAGTACGCCGTCCCCACCGGCCGCCGCGACGGTCTAGTATCCAACCCTAACAACGTTAACCTCCCGGGGCCAGATTCAACGGTAGCCCAAGCCTTCCAAATCTTCAGATCAAACGGCATGTCTCTGAACGAAATGGTTACTCTTTTGGGGGCCCACACCGTTGGTGTCGCTCATTGTGGCTTCTTTATAAACAGGCTCGGTGGGAGTGACAAAACAATGGACGCTACTTTGAGTTCGAACCTTGGGAAGCTTTGTGGGACCCCTTCTAAACCTAAGAACAATAATGGGAAGACGTTCTTGGATCAAAACACTTCTTTGGTGTTTGATAATCAGTTCTATAAACAGATTCTTAAAAGGCAAGGTGTGCTTTTCATTGATCAACAGTTGGCTTTGGATTCTTCTTCCAGAGGCTTCGTTTCCGGTTTTGCTGCTAATGCTCCCAGCTTTCAGCAGAGTTTTGTGAATGCCATTATCAAGATGGGAAAAACTGGTGTTAAGGTTGGTAAGGCTGGAGAGATTAGAAGAAATTGCAGGGCTTTCAATTAA 951 0.4658 MMMKLTIFVVLLFILPLASVAQLKVGFYAPNCPRAEAIVRQVVQKHFNADKTITGGLLRLHFHDCFVDGCDASILIDSKKGNQSEKDAGANGTVRGFEIIDEAKKLLEKACPNTVSCADIITLATRDSVDMAGGPKYAVPTGRRDGLVSNPNNVNLPGPDSTVAQAFQIFRSNGMSLNEMVTLLGAHTVGVAHCGFFINRLGGSDKTMDATLSSNLGKLCGTPSKPKNNNGKTFLDQNTSLVFDNQFYKQILKRQGVLFIDQQLALDSSSRGFVSGFAANAPSFQQSFVNAIIKMGKTGVKVGKAGEIRRNCRAFN 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30224g00009 316 ProSiteProfiles Plant heme peroxidase family profile. 22 316 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30224g00009 316 PANTHER - 3 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30224g00009 316 FunFam Peroxidase 26 166 - -
Stsc30224g00009 316 Pfam Peroxidase 39 279 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30224g00009 316 CDD secretory_peroxidase 22 315 IPR033905 GO:0004601|GO:0042744
Stsc30224g00009 316 ProSitePatterns Peroxidases proximal heme-ligand signature. 179 189 IPR019793 -
Stsc30224g00009 316 FunFam Peroxidase 157 295 - -
Stsc30224g00009 316 Gene3D - 26 316 - -
Stsc30224g00009 316 Gene3D Peroxidase, domain 2 157 295 - -
Stsc30224g00009 316 PRINTS Plant peroxidase signature 114 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30224g00009 316 PRINTS Plant peroxidase signature 32 51 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30224g00009 316 PRINTS Plant peroxidase signature 178 190 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30224g00009 316 PRINTS Plant peroxidase signature 250 267 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30224g00009 316 PRINTS Plant peroxidase signature 56 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30224g00009 316 PRINTS Plant peroxidase signature 234 249 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30224g00009 316 PRINTS Plant peroxidase signature 290 303 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30224g00009 316 PRINTS Plant peroxidase signature 95 108 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30224g00009 316 PRINTS Plant peroxidase signature 133 148 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30224g00009 316 PRINTS Haem peroxidase superfamily signature 133 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30224g00009 316 PRINTS Haem peroxidase superfamily signature 115 132 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30224g00009 316 PRINTS Haem peroxidase superfamily signature 54 68 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30224g00009 316 PRINTS Haem peroxidase superfamily signature 179 194 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30224g00009 316 PRINTS Haem peroxidase superfamily signature 236 251 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30224g00009 316 SUPERFAMILY Heme-dependent peroxidases 22 316 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc30224g00009 316 ProSitePatterns Peroxidases active site signature. 54 65 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30224g00009 Stsc-Chr30224 81024 82307 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30224g00009 2 316 Peroxidase AT4G26010 54.430 1.88e-125 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30224g00009 K00430 - csin:114291213 400.593