Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30222g00028 ATGGCATCATCACAACATCTTCTTGGAGTGGTGTGTAGTTGCATGATCACCATAATTTTGTTGGGTGCTTGTTCAAATGTTGTTGAAGGTGGTGGTAGAGATTTCAAGGTTGGTGATCACTTGGGTTGGCATGAACCTGCCCCAAATAATTCTGCATATTACATTCAATGGGCTCAAAGAAACAGATTCCAAATTGGTGACTCTCTTGTGTTTGAGTACCAAAATGACTCGGTTCTAGTTGTTGAGAAATGGAACTACTTCCATTGTGATACAAAGAATCCCATAACATCATATGATGATGGAAACAGCACAGTGATTCTTGATAGATCCGGTTTCTTCTACTTCATAAGTGGAACAGAGAACCACTGCCAGAGTGACCAGAAACTTATTGTGGAAGTTATCTCCCCACAGCACATGGCAATTGTTCCGGCCGCGGCCGCCTCCCCGGGGCCGGCCGAAGAAGCTTCCTCGTCGCCGGAAATGGCTCCTTCACCTTACCATTATTATCATCATGGATCCAGTGATGCTTCATCAACATCAAGTTTCATGCTGATTGGTTCAGCAATTATGGCTCTTCTTGTCACCTTTGTAGTTGTGCTAGTTTGA 606 0.4389 MASSQHLLGVVCSCMITIILLGACSNVVEGGGRDFKVGDHLGWHEPAPNNSAYYIQWAQRNRFQIGDSLVFEYQNDSVLVVEKWNYFHCDTKNPITSYDDGNSTVILDRSGFFYFISGTENHCQSDQKLIVEVISPQHMAIVPAAAASPGPAEEASSSPEMAPSPYHYYHHGSSDASSTSSFMLIGSAIMALLVTFVVVLV 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30222g00028 201 PANTHER BLUE COPPER PROTEIN 34 152 IPR039391 GO:0009055
Stsc30222g00028 201 CDD OsENODL1_like 33 134 IPR041846 -
Stsc30222g00028 201 Gene3D - 33 144 IPR008972 -
Stsc30222g00028 201 FunFam Early nodulin-like protein 1 32 138 - -
Stsc30222g00028 201 Pfam Plastocyanin-like domain 50 127 IPR003245 GO:0009055
Stsc30222g00028 201 ProSiteProfiles Phytocyanin domain profile. 33 135 IPR003245 GO:0009055
Stsc30222g00028 201 SUPERFAMILY Cupredoxins 33 134 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30222g00028 Stsc-Chr30222 169515 170390 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30222g00028 13 134 Phytocyanin Superfamily AT1G79800 53.968 8.78e-44 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30222g00028 - - aip:107614831 289.271