Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30222g00011 ATGCCTGCCATAGCACTCGGACGTTTTGACGATTCTTTCAGCTTAGGCTCCATCAAAGCCTACATTGCTGAGTTCATCTCAACTTTGATCTTTGTTTTTGCTGGTGTTGGTTCAGCTATAGCCTATGGAAAGCTGACATCAGATGCAGCACTTGACCCAGCTGGATTGGTAGCAGTGGCTGTGTGCCATGGATTTGCTCTGTTTGTTGCAGTTTCAGTTGGTGCCAACATCTCTGGTGGACATGTAAACCCTGCTGTCACATTTGGTTTGGCACTTGGAGGCCAAATCACAGTCCTCACTGGAATCTTCTACTGGATTGCTCAGCTTGTTGGATCCATTGTTGCATGTTTCCTCCTTTCTTATGTCACTGGTGGATTGACAACTCCAATCCAGTGTGGCAGCAGGAGTAGGAGCATTTGA 420 0.469 MPAIALGRFDDSFSLGSIKAYIAEFISTLIFVFAGVGSAIAYGKLTSDAALDPAGLVAVAVCHGFALFVAVSVGANISGGHVNPAVTFGLALGGQITVLTGIFYWIAQLVGSIVACFLLSYVTGGLTTPIQCGSRSRSI 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30222g00011 139 Gene3D Glycerol uptake facilitator protein. 2 137 IPR023271 -
Stsc30222g00011 139 Pfam Major intrinsic protein 15 127 IPR000425 GO:0015267|GO:0016020|GO:0055085
Stsc30222g00011 139 SUPERFAMILY Aquaporin-like 13 127 IPR023271 -
Stsc30222g00011 139 PANTHER AQUAPORIN-8 4 130 IPR034294 -
Stsc30222g00011 139 ProSitePatterns MIP family signature. 81 89 IPR022357 -
Stsc30222g00011 139 PRINTS Major intrinsic protein family signature 100 119 IPR000425 GO:0015267|GO:0016020|GO:0055085
Stsc30222g00011 139 PRINTS Major intrinsic protein family signature 19 38 IPR000425 GO:0015267|GO:0016020|GO:0055085
Stsc30222g00011 139 PRINTS Major intrinsic protein family signature 63 87 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30222g00011 Stsc-Chr30222 55748 56934 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30222g00011 1 131 Major Intrinsic Protein MIP AT3G16240 79.389 1.60e-70 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30222g00011 K09873 - qsa:O6P43_018186 236.884