Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30221g00042 ATGGCGTCTGTATCAGGCAGCATGAAGGGTTTTTACAGGCAGAAGAAGAACACCACCAAATCTTCCAAGAAAGCCCCTGCTAATGCTAAGTCCGATGCACCCCAACTCGTCTCCCACGCCGACGATGATTATAGTGCTAGCGAGGCAATGCTGCGGCAATTCGACATGAACATGGCGTATGGCCCTTGCGCTGGGATGACAAGGGCGGCACGGTGGGAGCGTGCTCAAAAGCTTGGTCTCAACCCTCCACAGGCAATCCAGACCCTCTTGAACAGTGGCAAGGTTCAGAGCGAATCCTTGTGGGATGGTCGCATTTAG 318 0.5377 MASVSGSMKGFYRQKKNTTKSSKKAPANAKSDAPQLVSHADDDYSASEAMLRQFDMNMAYGPCAGMTRAARWERAQKLGLNPPQAIQTLLNSGKVQSESLWDGRI 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30221g00042 105 PANTHER DNA POLYMERASE DELTA SUBUNIT 4 1 103 IPR007218 GO:0000731|GO:0006260
Stsc30221g00042 105 MobiDBLite consensus disorder prediction 1 28 - -
Stsc30221g00042 105 MobiDBLite consensus disorder prediction 1 41 - -
Stsc30221g00042 105 Pfam DNA polymerase delta, subunit 4 15 94 IPR007218 GO:0000731|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30221g00042 Stsc-Chr30221 199486 200346 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30221g00042 1 105 Core DNA Replication Machinery Family AT1G09815 47.581 6.88e-35 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30221g00042 K03505 - gmx:100778329 142.51