Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30221g00031 ATGGAGAATAATAAGAAGAAGAAGGAGAATTGCAAGTACTACCAACAAGGTGATTTAAGTGACATAATCCGTGCTAGTTATGGTTATTATGGTACCTTCAGCAGCACTTCATCATCTGAAGCTTCTTCTTATAATCATCACAGCATGGTGGATCTGGAAGACCCTCCTATGATGGATAACTTTGGTGATCCTTTCTCAAACTTTGGAGGAGATCCATTTCTGCATGCTGATATGATGCCCTACTTTGACACTTCATCTTGGGGACTGATGATGGAAGAAGAAGCACCTACTGCTAATTGTTTTGATAATGATGACGATGATGATATGAAAAGACCTTGTCATTACATCACTCAGATCTCTCATGATTATTCTTCGTCCTCGCCGATTATGGCAGCGGTTAATAATAACAAGCCTCACCCTCCTTCTTCTTCTGCTGTGGTGGACAACAACACAGGACCAGTAGTAGTGCAGATCTCATCATCTCCTCTTAATAAGCCAAGCAGGAAAAATCAGGCAAAGAAATCGATTTGTATTCCAGCAGCAGCACCACCGAGCAATAGACAAGGTGTGGGAGAGGTAGTTCCCTCTGATCTCTGGGCTTGGAGAAAGTATGGTCAAAAACCCATTAAAGGTTCTCCATATCCAAGGGGTTACTATAGATGCAGCAGCACAAAGGGTTGCCCTGCAAGGAAACAAGTGGAGAGGAGCAGAACAGATCCAAACATGTTGGTCATTACTTACACTTGTGAACACAACCATTCATGGCCAATAACTCAAAGAAATGCTTTGGCTGGTTCATCCCGATCCACTAAGAATATACAAGAGCAACAACACAGCAACAGTGATGACAGCAACACTCCGTTACTCGCAGTGAAGCAAGAAGACATGGATAATAATAATAACAATAACAAAGTTGAGGACTCGTTTGCCGAATTGGGACAAGTGGAAGGTGATTATATATGTTGA 966 0.4203 MENNKKKKENCKYYQQGDLSDIIRASYGYYGTFSSTSSSEASSYNHHSMVDLEDPPMMDNFGDPFSNFGGDPFLHADMMPYFDTSSWGLMMEEEAPTANCFDNDDDDDMKRPCHYITQISHDYSSSSPIMAAVNNNKPHPPSSSAVVDNNTGPVVVQISSSPLNKPSRKNQAKKSICIPAAAPPSNRQGVGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSTKGCPARKQVERSRTDPNMLVITYTCEHNHSWPITQRNALAGSSRSTKNIQEQQHSNSDDSNTPLLAVKQEDMDNNNNNNKVEDSFAELGQVEGDYIC 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30221g00031 321 FunFam probable WRKY transcription factor 14 168 249 - -
Stsc30221g00031 321 SUPERFAMILY WRKY DNA-binding domain 193 256 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc30221g00031 321 ProSiteProfiles WRKY domain profile. 190 256 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc30221g00031 321 SMART WRKY_cls 195 255 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc30221g00031 321 Gene3D WRKY domain 168 249 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc30221g00031 321 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 121 303 IPR044810 GO:0003700
Stsc30221g00031 321 MobiDBLite consensus disorder prediction 264 286 - -
Stsc30221g00031 321 Pfam WRKY DNA -binding domain 197 253 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30221g00031 Stsc-Chr30221 150730 152635 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30221g00031 61 265 WRKY Transcription Factor Family AT2G34830 52.155 3.85e-57 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Stsc30221g00031 WRKY 3.6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30221g00031 - - aip:107634728 350.903