Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc30221g00019 | ATGGCATCATCGAAAGCCTTTGGCTGGGCTGCAAAAGATGCCTCCGGCCATCTCTCTCCCTTCCATTTCACAAGAAGGCAAAACGAAGCTGATGACGTCACGCTGAAAATCCTCTACTGCGGGGTTTGCCATTCCGATCTCCACACAGTCAAGAACGACTGGGGTTTCACTACTTACCCTGTTGTCCCTGGGCATGAAATTGCTGGTATTGTGACAAAAGTTGGAAGTAATGTGACAAAATTTAAGGAGGGTGATAGAGTTGGAGTTGGTGTAATAGTGGACTCATGTCAGGAATGTGAGTGTTGCCAGCAGGATCTGGAGAGTTACTGTCCTAAACCTGTGTTTACCTATAACTCTCCTTATAAAGGGACACGAACCCAGGGTGGCTACTCTGATTTTGTGGTTGTACATCAGCGCTTTGTGCTTCAATTTCCTGACAACCTACCCCTTGATGCCGGTGCCCCGCTTCTGTGTGCTGGGATCACTGTGTATAGTCCTATGAAGTATTATGGCATGACAGAGCCGGGCAAGCATTTGGGAGTCGCCGGGCTTGGTGGCTTAGGCCATGTTGCCATCAAATTTGGCAAAGCATTTGGTCTCAAAGTTACTGTCATTAGTAGCTCTCCCAACAAGGAATCTGAAGCTATTGACGTTCTAGGGGCTGATTCTTTCCTTCTTTCCTCTGACCCTGAAAAGATGAAGGCTGCTACCGGAACGATGGATTATATCATTGACACGATTTCTGCTGTTCATTCGCTGGTTTCCCTGCTTGGTCTGCTGAAGCTGAACGGAAAGTTGGTCACCGTGGGGCTGCCTAGCAAGCCGCTTCAGCTGCCTATCTTTCCCTTGGTTGCAGGAAGGAAGCTTATAGGGGGAAGCAACTTTGGAGGGCTGAAGGAGACTCAGGAGATGCTTGATTTCTGTGGAAAGCATAACATAGCTGCAAATATTGAGCTGATTAAGATGGATGAGATCAACACTGCTATAGAAAGGCTCAGCAAAGCTGATGTTAAGTATCGCTTTGTCATTGATGTTGCAAACTCCTTATCATCCAGTAACATGTAG | 1065 | 0.4714 | MASSKAFGWAAKDASGHLSPFHFTRRQNEADDVTLKILYCGVCHSDLHTVKNDWGFTTYPVVPGHEIAGIVTKVGSNVTKFKEGDRVGVGVIVDSCQECECCQQDLESYCPKPVFTYNSPYKGTRTQGGYSDFVVVHQRFVLQFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAIKFGKAFGLKVTVISSSPNKESEAIDVLGADSFLLSSDPEKMKAATGTMDYIIDTISAVHSLVSLLGLLKLNGKLVTVGLPSKPLQLPIFPLVAGRKLIGGSNFGGLKETQEMLDFCGKHNIAANIELIKMDEINTAIERLSKADVKYRFVIDVANSLSSSNM | 354 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc30221g00019 | 354 | SMART | PKS_ER_names_mod | 16 | 343 | IPR020843 | GO:0016491 | |
Stsc30221g00019 | 354 | FunFam | probable cinnamyl alcohol dehydrogenase | 9 | 167 | - | - | |
Stsc30221g00019 | 354 | Pfam | Zinc-binding dehydrogenase | 186 | 307 | IPR013149 | - | |
Stsc30221g00019 | 354 | FunFam | Cinnamyl alcohol dehydrogenase | 159 | 315 | - | - | |
Stsc30221g00019 | 354 | Pfam | Alcohol dehydrogenase GroES-like domain | 31 | 143 | IPR013154 | - | |
Stsc30221g00019 | 354 | Gene3D | - | 9 | 345 | - | - | |
Stsc30221g00019 | 354 | ProSitePatterns | Zinc-containing alcohol dehydrogenases signature. | 64 | 78 | IPR002328 | GO:0008270|GO:0016491 | |
Stsc30221g00019 | 354 | Gene3D | - | 159 | 315 | - | - | |
Stsc30221g00019 | 354 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 148 | 313 | IPR036291 | - | |
Stsc30221g00019 | 354 | PANTHER | ALDEHYDE REDUCTASE | 4 | 348 | IPR047109 | GO:0016616 | |
Stsc30221g00019 | 354 | CDD | CAD1 | 7 | 344 | IPR047109 | GO:0016616 | |
Stsc30221g00019 | 354 | SUPERFAMILY | GroES-like | 13 | 177 | IPR011032 | - | |
Stsc30221g00019 | 354 | FunFam | Putative cinnamyl alcohol dehydrogenase 6 | 316 | 345 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc30221g00019 | Stsc-Chr30221 | 78465 | 81948 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc30221g00019 | 4 | 349 | Monolignol Biosynthesis Gene Families | AT2G21730 | 71.920 | 0.0 | 514 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc30221g00019 | K00083 | - | gmx:100795575 | 578.17 |