Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30221g00016 ATGGCGTCGTCGAAGATTGTCACGATGAATACGGATCTGCCACGCGACTCTTCTTCTTCTTCTTCACCATCATCCTTGTCTTCTTCTTCTGCTGCTGCTGTTGCTGCTTCTTCTTCTTCCTCTTATTTCCTTCTTCATGATCAAAATCTGCATTATTATTCAAACTCTTCCATGGTTATGGACGACCTTCTAAACTCCATCTACACCACAACAACAACAACAACCGCTCATCCCTCGAACCCTTCTTCATCCCCTCCTCCTCCGCCCAAAACCGTCGACGATGTCTGGAAAGACATGATCCTAATCCACTCTCACAGAGACTCACCTCATCATAATCACCACCCGTTCGAGGAAATGACGCTTGAGGCTTTCCTCTCTAAAAACGGTGCCGTCACTGATGACGACGTCACCGCTGTTCCTTCTCTTCATAATCATCATCCTGTTCCTCATCAGTTCCCCCCGGTGCCCGCCGTTGAAGGCTCATCCTCCTCCGCGGCTGAGCCTTTTGCAAATGGGATTGATGCTGCGGTGGCTGGTGGAGTCCCAGTACCCTCGTCATCATCAGGAGGAGGCGGAGGTGGTGGAGGAGGAGGAGCAGCTGCAGTGGCAAAGGGAAAGAGAAGGGCGGTGGAGGAACCAGTGGATAAGGCCACTCTTCAGAAGCAGAGACGCATGATCAAGAATCGTGAGTCTGCAGCTAGGTCCAGGGAACGCAAGCAGGCTTACACAACTGACCTTGAGTCTAATGTTCAACAACTGGAGATAGAGAATGCCCGATTATTGAGTGAAGAGGCTGAAAAGAAAAAGAAGAGGTTGAAGGAGCTTCTTGAGTTCGTCATTCCAGTTGTGGAGAAGCGTAAACCAAAACGGCTTCTAAGAACAAATTCAGTTCAGTCACTGTGA 903 0.495 MASSKIVTMNTDLPRDSSSSSSPSSLSSSSAAAVAASSSSSYFLLHDQNLHYYSNSSMVMDDLLNSIYTTTTTTTAHPSNPSSSPPPPPKTVDDVWKDMILIHSHRDSPHHNHHPFEEMTLEAFLSKNGAVTDDDVTAVPSLHNHHPVPHQFPPVPAVEGSSSSAAEPFANGIDAAVAGGVPVPSSSSGGGGGGGGGGAAAVAKGKRRAVEEPVDKATLQKQRRMIKNRESAARSRERKQAYTTDLESNVQQLEIENARLLSEEAEKKKKRLKELLEFVIPVVEKRKPKRLLRTNSVQSL 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30221g00016 300 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 53 272 IPR043452 GO:0003700|GO:0045893
Stsc30221g00016 300 MobiDBLite consensus disorder prediction 205 243 - -
Stsc30221g00016 300 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 218 263 IPR004827 GO:0003700|GO:0006355
Stsc30221g00016 300 MobiDBLite consensus disorder prediction 72 92 - -
Stsc30221g00016 300 Gene3D - 219 277 - -
Stsc30221g00016 300 SMART brlzneu 216 278 IPR004827 GO:0003700|GO:0006355
Stsc30221g00016 300 SUPERFAMILY Leucine zipper domain 220 268 IPR046347 GO:0003700|GO:0006355
Stsc30221g00016 300 Coils Coil 243 275 - -
Stsc30221g00016 300 Pfam bZIP transcription factor 217 275 IPR004827 GO:0003700|GO:0006355
Stsc30221g00016 300 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 223 238 IPR004827 GO:0003700|GO:0006355
Stsc30221g00016 300 CDD bZIP_plant_BZIP46 220 260 - -
Stsc30221g00016 300 MobiDBLite consensus disorder prediction 184 245 - -
Stsc30221g00016 300 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30221g00016 Stsc-Chr30221 68207 71333 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30221g00016 69 293 bZIP Transcription Factor Family AT5G44080 39.167 2.38e-35 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Stsc30221g00016 bZIP_1 3.5e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30221g00016 K14432 - gmx:100101890 166.007