Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30221g00006 ATGGCATTTGCTGCGGTGAATATTTTGTACAAGATGGCCATCAATGATGGAATGAGCATGACTGTTGCCACTGCTTATCGCCTCATCTTTGCATCTGCCTTTACTATCCTTGTTGCTATCATTTTTGAGAGAAAAAATAACAATAAAGCAAGGATTACTCCAAGGGTGCTTCTTTTGGAATTTCTCTGTGGACTGTTTGGAGGAACTTTATTTCTCAACTTTTACTTCGCCTCATTGGCTTTGATGCCAGCAACGTTTGTATTGGCCATCATTAATCTATGTCCAGCTCTCACCTTCATCATAGCAGTTATCTCGGGTTTGGAAAAATTGAACTTGGGAGCAGCAGCAGGGAAGGCCAAGGTAATAGGAACATTAACTGGAATCAGTGGTGCAATGTTCTTGACCTTGTACAAAGGCATACGAATTGATATTTGGTCTTCTCATATTAACCTCTTGCATCATCCACATGGCGGCGCTCATAAAGGTAACGAATTCGTGGGTATTGCATATGGAATTGCAAGCTGCTGCTCTTTTTCATTGTGGCTCAACATTCAGGCCAAGGCCAATCAAGAATTCCCAATGCATTACACAGGCACAGCTCTAATGTGCTCAATGGCTGCACTACAATCCACTGTTCTTGCTCTCTGTGTTGACAGGGATTGGGCCTCCCAATGGAAGCTATCTTGGAATATCAGGCTCCTCACTGTTTCTTATGCAGGAATTGTGGGGTCTGGGATGGTGGTTATTATTACTGCATGGTGTGTACATAAGAGAGGACCTCTATTTGGGTCTATTTTCAACCCTCTGCAGCTTGTCATTGTGGCTATAGCTGCTTCCCTCTTGTTGAATGAGCATTTATATTTAGGAAGTGTGATTGGAGGAGTGTTGATAGTGATTGGGCTATACTCAGTGCTTTGGGGGAACAGCAGAGAAACCAAACACGAGATTCAAGATCAGTCTCAGTTATTAGAAGAAATCACAAGAGATCCTGTTCAAGTGACTGTTATCATCATCAAATTCTAA 1023 0.4233 MAFAAVNILYKMAINDGMSMTVATAYRLIFASAFTILVAIIFERKNNNKARITPRVLLLEFLCGLFGGTLFLNFYFASLALMPATFVLAIINLCPALTFIIAVISGLEKLNLGAAAGKAKVIGTLTGISGAMFLTLYKGIRIDIWSSHINLLHHPHGGAHKGNEFVGIAYGIASCCSFSLWLNIQAKANQEFPMHYTGTALMCSMAALQSTVLALCVDRDWASQWKLSWNIRLLTVSYAGIVGSGMVVIITAWCVHKRGPLFGSIFNPLQLVIVAIAASLLLNEHLYLGSVIGGVLIVIGLYSVLWGNSRETKHEIQDQSQLLEEITRDPVQVTVIIIKF 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30221g00006 340 PANTHER WAT1-RELATED PROTEIN 2 315 IPR030184 GO:0016020|GO:0022857
Stsc30221g00006 340 SUPERFAMILY Multidrug resistance efflux transporter EmrE 26 134 - -
Stsc30221g00006 340 Pfam EamA-like transporter family 167 305 IPR000620 GO:0016020
Stsc30221g00006 340 Pfam EamA-like transporter family 3 134 IPR000620 GO:0016020
Stsc30221g00006 340 SUPERFAMILY Multidrug resistance efflux transporter EmrE 213 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30221g00006 Stsc-Chr30221 23211 29643 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30221g00006 3 313 Nodulin-like Gene Family AT1G25270 42.357 4.14e-79 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30221g00006 - - mtr:25493310 338.576