Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30221g00005 ATGGAAGGGTTATGTAAGGCGTTGCAAGGGTTGAAGCCAATAATACTAATGGTGTTTGCGCAGATAGCACTTGCGGCTGTGAATGTGTTGTTCAAGATGGCCATCAATGATGGAATGAGCATGACAGTTGCCACTGCTTATCGCCTCATCTTTGCATCTGCCTTCTCTATCCCTCTTGCTATCATCTTTGACACTAAAAATAAGAATCAAGCAAAGATTACTCCGAGGGTGCTTCTTTTCGAATTTCTTTGCGCATTGTTTGGAGGAACTTTATGTCTCAACTTTTACTTCGCGGCAATGGCTTTGATGCCAGCAACGTTTGTGTTGGCCATCCTTAATCTTTCTCCAGCTCTCACCTTCATCATGGCCTTGACCACAGGTTTGGAAAAATTGAACTTGGGAGCAGCAGCAGGGAAGGCCAAGGTAATAGGAACATTAACTGGAATCAGTGGTGCAATGTTCTTGACCTTGTACAAAGGCATACGAATTGATGTTTGGTCTTCTTCTTCCCCTATCAACCTCTTGCATCATCCACATGGCCACGGTGATGATAATGGTAACAAATTCTTGGGTATTGCTTATGCAATTGCAAGCTGTTGCTCTTATGCATTGTGGCTCAACATTCAGGCAAAGGTGAATAAGGAATTCCCAAGGCAGCACACAGGCACAGCTCTAATGTGCTCAATGGCTGCACTACAATCCACTGTCTTTGCTCTCTGTGTTGACAGGGATTGGGCCTCCCAATGGAAGCTATCTTGGAATATCAGGCTCCTCACTGTTTCTTATGCAGGAATTGTGGCGTCTGGAATGGTGATTAATATTATTGCATGGTGTGTACATAAGAGAGGCCCTCTGTTTGGCTCTATTTTCAATCCACTGCAGCTCGTGCTTGTGGCTATCGCAGCTTCCTTCACGTTGAATGAGCATTTATATTTAGGAAGTGTGATTGGAGGAGTGTTGATAGTGAGTGGGCTATACTCAGTGCTTTGGGGGAACAGCAGAGAAACCAAACACAAGATTCAAGACCAGACTCAGNNNNNNNNNNCAGAAGAAATCACAAGGGATCCTGTTCAAGTGATTGTTATATCCCCACACAAAGAACAACAAAACAAGGACAACAATAGTCATCAACAAATTCAAAACCCTCTTTCTAATGAACAAGAATTGCCCTCCTAA 1176 0.4328 MEGLCKALQGLKPIILMVFAQIALAAVNVLFKMAINDGMSMTVATAYRLIFASAFSIPLAIIFDTKNKNQAKITPRVLLFEFLCALFGGTLCLNFYFAAMALMPATFVLAILNLSPALTFIMALTTGLEKLNLGAAAGKAKVIGTLTGISGAMFLTLYKGIRIDVWSSSSPINLLHHPHGHGDDNGNKFLGIAYAIASCCSYALWLNIQAKVNKEFPRQHTGTALMCSMAALQSTVFALCVDRDWASQWKLSWNIRLLTVSYAGIVASGMVINIIAWCVHKRGPLFGSIFNPLQLVLVAIAASFTLNEHLYLGSVIGGVLIVSGLYSVLWGNSRETKHKIQDQTQXXXXEEITRDPVQVIVISPHKEQQNKDNNSHQQIQNPLSNEQELPS 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30221g00005 391 PANTHER WAT1-RELATED PROTEIN 12 342 IPR030184 GO:0016020|GO:0022857
Stsc30221g00005 391 MobiDBLite consensus disorder prediction 363 391 - -
Stsc30221g00005 391 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 156 - -
Stsc30221g00005 391 SUPERFAMILY Multidrug resistance efflux transporter EmrE 236 334 - -
Stsc30221g00005 391 Pfam EamA-like transporter family 12 155 IPR000620 GO:0016020
Stsc30221g00005 391 Pfam EamA-like transporter family 190 329 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30221g00005 Stsc-Chr30221 17510 19183 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30221g00005 11 337 Nodulin-like Gene Family AT1G25270 40.729 4.71e-81 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30221g00005 - - gmx:100803545 370.933