Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30221g00004 ATGGAAGGGTTGAAAGCAGTGTTATTAATGGTGTTACTACAGATATTATATGCTGTGCTGAACATATTGTATAAGCTGGCTATATTTGATGGAATGAGCATGAGAGTGGCTTCTGCTTACCGTCTCATATTTGCATCTGCCTTCACTCTCCCACTTGCTCTCTTCTTTGATTGGAACAACCCACCAAGAATCACTCGCAGGGTGCTTCTTATGGAATGTCTTTGTGGATTTTTCGGGGGAAGTTTATTTCTGAACCTTTATTTCGCTGCCCTGTCTCTGTTGCCGGCGACGTTCATGTTGGCCATCAACAACCTTGCTCCGGCTGTCACCTTCGTTATGGCCATAATCTTCCGTTTGGAAAAATTAAAGTTGGGATCAGCAGCAGGAAAAGCAAAGGCAATAGGAACATTAACTGGAATTACAGGGGCAATGCTGCTAAGCTTCTTCAGGGGATTTGAAATTGATATTTGGAAAACACACATAGATCTCTTGCATCCACATCATCATCATAGTAATAACAATAATCACACACCACCACTACATGGTGATGAATATGGCAACAAACTCTTGGGTCTCACTTATGCCATAGCAAGCTGCTGCTCTTTTTCTTTGTGGCTCAACATTCAGGGTAAAATGAATACGAAAGAATACCCAAGTCATCTCACAGGGACGGCAATGATGTCCACAATGGGTGCAATTCAAGCCACTGTTTTTGCTCTCATTCTTGATAGGGATTGGAGTCAATGGCGTCTCGGTTGGAATATAAGGCTTCTCACTGTGGCTTACGCGGGAATTGTAGGTTCAGGAATAGTGGTTATTATTACAGCGTGGTGCATAGAAAAGAGAGGGCCTCTGTTTGCGTCAATTTTCAACCCTCTACAACTTGTGCTTGTGGCAGTCGTTGCTTCTTTGATTCTGAATGAGAATTTATATTTAGGGAGTGTGGTTGGAGGAGTGGTGATTGTGATTGGGCTGTACACGGTGCTATGGGGAAAGAGCAAAGAGATTCAAGAGTTAGTATCCTCATCACAAATCAATAATAATAATAATGGATCTTCTGAAGCTGTTGATGTTGTTGTTAGAGATGATCATCATAAAAGTGATGAACAACAACACACCAACAATATTATATAA 1134 0.4153 MEGLKAVLLMVLLQILYAVLNILYKLAIFDGMSMRVASAYRLIFASAFTLPLALFFDWNNPPRITRRVLLMECLCGFFGGSLFLNLYFAALSLLPATFMLAINNLAPAVTFVMAIIFRLEKLKLGSAAGKAKAIGTLTGITGAMLLSFFRGFEIDIWKTHIDLLHPHHHHSNNNNHTPPLHGDEYGNKLLGLTYAIASCCSFSLWLNIQGKMNTKEYPSHLTGTAMMSTMGAIQATVFALILDRDWSQWRLGWNIRLLTVAYAGIVGSGIVVIITAWCIEKRGPLFASIFNPLQLVLVAVVASLILNENLYLGSVVGGVVIVIGLYTVLWGKSKEIQELVSSSQINNNNNGSSEAVDVVVRDDHHKSDEQQHTNNII 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30221g00004 377 Coils Coil 377 377 - -
Stsc30221g00004 377 SUPERFAMILY Multidrug resistance efflux transporter EmrE 40 149 - -
Stsc30221g00004 377 PANTHER WAT1-RELATED PROTEIN 6 342 IPR030184 GO:0016020|GO:0022857
Stsc30221g00004 377 SUPERFAMILY Multidrug resistance efflux transporter EmrE 245 334 - -
Stsc30221g00004 377 Pfam EamA-like transporter family 5 147 IPR000620 GO:0016020
Stsc30221g00004 377 Pfam EamA-like transporter family 190 329 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30221g00004 Stsc-Chr30221 12666 14922 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30221g00004 4 350 Nodulin-like Gene Family AT1G25270 40.286 8.68e-88 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30221g00004 - - gmx:100798755 382.104