Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30220g00032 ATGGAGGCAGTTATTATGAGTTCCATACTCCTTTTCCTATTAACCTTCATCGTGGTCCATCTCCTTGCTCGTTCTTCCCTTCTCACCAAATCATCAAAACACAAGCTTCCGCTTCCACCAGCACCCAATGCCATCCCCATCTTCGGAAACCTCCTTCAACTCGGCAATAAGCCACACCAAACACTCGCCAAACTCTCCAAGATCCACGGCCCAATCATGCGCCTCAAGCTAGGCCATGTAACCACGGTCGTCATGTCTTCAGCCGAAACCGCCAAGTCAGCCCTCCAAATCCACGACCAGCACCTTTCCAACCGGAAGATCCCGGACGCAATGAAAGGCGCCGGCCACGACGCCTACAGCCTCCCTTTTATGCCGGTCTCGCCGCGGTGGCGAGACCTAAGAAAAATATGCAACAACTTGCTCTTCTCCAACAAGAATCTTGACGCGAGCCAAGAGCTGAGGCAAAGAAAGATAAGAGAACTGTTGGCGCACGTTAAAGAGAGTAGCTTGAAACGAGAGGTAGTGGATATTGGTAGGCTTGCTTTCATGACAACAATCAACTTGTTGTCCAACACCTTCTACTCCAAGGACTTAATCAATTCCTCCGACGTGGCGGGGGAGTTCAAGGAGCTGGTGACCAACGTTATGAAGGAGGTTGGGAGGCCGAACCTGGCGGATTGTTTTCCGGTGCTGAAGGCGGTGGACCCTCATGGCATAAGGAGGCGGACGGGGAGCTACTTTGGGAAGGTCTTGGGCATCTTTGAAGGTTTGGTTAGGGAGAGGTTGAGTGTACGGAGTGAGGGTAGTTACTGTCCAAGAAACGATATATTGGATTTGATGCTCGATAACGCCCCACATGATCAACACATGTATAAGGACAAGATTGAGCGTCTCTCATTGGACCTGTTTTTGGCTGGACCAGACACAATTACATCTACAGTGGAATGGGCGATGGCAGAGTTACTTCACAATCCAAATGTGATGTCAAAGGCAAGGTCAGAATTAGAGGAAACAGTGGGAAAAGGTAACCTACTATTAGAAGAATCAGACATTGCAAGGGTGCCATACTTGCAGGCAATAATAAAAGAAACATTCCGAATGCACCCGGCAGTTCCCCTTCTACTCCCTCGGCAAGCAGAAATAGATATTGAGATTGGGGGATACACGGTGCCAAGGGGTGCACAGGTTCTTGTTAACGTGTGGGCTATTGGAAGGGATCCAAACTTGTGGGACAATCCAGATGTGTTCTCTCCTGAGCGATTCTTAGGATCCGAAATCGACTTTAGAGGCCGCAATTTCGAGCTCACTCCATTTGGTGCTGGAAGAAGGATATGTCCTGGTTTGCCCCTGGCTATCAGGATGCTGTTCTTGATGTTGGTTTTGTTTATTAACTGTTTTGATTGGAAGCTTGAAGATCGGATCCAACCTCAGGATATGGATATGGATGAAAAGTTTGGACTCACTCTGGAGAAGGCTCAACCTGTGCGTGTTCTTCCCATAATTCGCTAG 1509 0.4871 MEAVIMSSILLFLLTFIVVHLLARSSLLTKSSKHKLPLPPAPNAIPIFGNLLQLGNKPHQTLAKLSKIHGPIMRLKLGHVTTVVMSSAETAKSALQIHDQHLSNRKIPDAMKGAGHDAYSLPFMPVSPRWRDLRKICNNLLFSNKNLDASQELRQRKIRELLAHVKESSLKREVVDIGRLAFMTTINLLSNTFYSKDLINSSDVAGEFKELVTNVMKEVGRPNLADCFPVLKAVDPHGIRRRTGSYFGKVLGIFEGLVRERLSVRSEGSYCPRNDILDLMLDNAPHDQHMYKDKIERLSLDLFLAGPDTITSTVEWAMAELLHNPNVMSKARSELEETVGKGNLLLEESDIARVPYLQAIIKETFRMHPAVPLLLPRQAEIDIEIGGYTVPRGAQVLVNVWAIGRDPNLWDNPDVFSPERFLGSEIDFRGRNFELTPFGAGRRICPGLPLAIRMLFLMLVLFINCFDWKLEDRIQPQDMDMDEKFGLTLEKAQPVRVLPIIR 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30220g00032 502 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30220g00032 502 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30220g00032 502 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30220g00032 502 PRINTS P450 superfamily signature 445 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30220g00032 502 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 12 500 - -
Stsc30220g00032 502 Gene3D Cytochrome P450 25 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30220g00032 502 SUPERFAMILY Cytochrome P450 39 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30220g00032 502 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Stsc30220g00032 502 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30220g00032 502 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30220g00032 502 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30220g00032 502 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30220g00032 502 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30220g00032 502 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30220g00032 502 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30220g00032 502 Pfam Cytochrome P450 39 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30220g00032 502 CDD CYP76-like 66 499 - -
Stsc30220g00032 502 FunFam Cytochrome P450 76C4 30 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30220g00032 Stsc-Chr30220 271561 273812 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30220g00032 4 500 Cytochrome P450 AT2G45550 43.849 2.44e-156 453
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30220g00032 - - lja:Lj2g3v0039250.1 647.506