Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30219g00034 ATGACGACGAGTACCATAGTAAGAGAACAGAACCTGGAGAAGCACATTCACAAGCAAATGGGGTGCATGGCTGGCTTCCTTAACATTTTCGACCGCCACCAGATTCTCGCCGGAAAACGCATCTCCTCCACCAAACGCCTCCCCGCTCCGCAACCGGATTCCTCGCCAGAGTCGGAGAACCACGCGGCTTCACCGGCGCGTCCATCAACGCCATCACCAGAGCGCGTGAAAAAGAGCCCAGCGAGAGAGCACACGGTTACGACCGTTACTACTCTACCGGTTTTGGAATTCAAGGAAGGGACGAGGTCCACGTGGAAGTTCTCAAGGGAGGCTCCGAGGCTCTCATTAGACAGCAGGACCCGAACCACCTCCCCGAGCCTGAGCCTCTCCCCGAACCTCACTACGGAGAACGGAGGAGAGAAACTGTCTTCAGAGATACAGTTACAGCGCCGTTCAACAAGTAGTGTCGTAGCGAGGCTCATGGGCCTGGAGCCCTTACCGGGCCCAGACTCGGATCCAGGGCCCAATAAGAAACCTGAGCTCAGAAGATCCGCTTCCGAATCCAGAGCCTCCAGAGATCTCAACCGTTTCTTCGACGCCGCTACCGGTAACGGTTATCAGCTGAACCTCAAGCAGGTGCAGCAACGGCAACAGTACACTCAACCGCAGTGGATAGTCTCTGAGGGTTTGAACAACAATGCAGGTTCAGACCCGGCAGAACAGGGTGCACGGAACAACAACAACGCGAAGCGAGAGAAGAACTATAACAACAATGCAAGGAACAGGGGAGTAGTTACGATGGTGCAGAAGAAGAGCTTCTTTGACTCCGCGGATTTCTTTCCCGAGGTACCAAAACGCAGCGTTTCGATCTACGGCGAGATCGAGAGGAGACTGAGGATGCGAGGTATCGACGAGCCTTCGAAGGATCTAGAAACTCTGAAGCATATCTTGGAGGCATTGCAGCTTAAAGGACTCTTGCATTCGAATAATCACGCAAATCGAAGTAACTGTAACAACCACTACAATATTAATGACATTCACAATCAGAATCACATGAACTTCGTTCTCGATGGCGGAAGAACGAAGAACGATTCTCCTATTGTTGTGATTAAACCGGTTCGATCTAACCGAACCGGTAGCGATTCCCCGACGTCAAGCTTCCGGTCTAGTCCGAGGACTCGCCGGAACGAACGACAGCCGGAGTTTGATCGGAGAAGTAGAAACGCGAAATCGCCGCCACTTTGTAGGAGCCCGAACCGGAGGAATGTAGCAGCGAACGCGGCGGAGAATCATCACCACAATAGAGTGAATGTTAACGACGGCTTTGATTCAAGAAAGGTGTCCCCGGTTCAGTCGCCGAGAGTAAACTCAGGAAGAAACACTCCGGTTCATTCTCCAAGAATGAGAAAACCGATTGATCAGAAGGAAGAGAAGTTGTTGACTGTAGCAGAGGATGAATCTTCCACAGTTTCAGAGAGTAGCTTCAGCACTTCTTCACATACAGATACAGAGAGGTACAGATTGGAAGAGTACAAAGAAGGGAGGAATTTACTGGATAGGTGTGACAAGTTGCTGAACAGCATAGCGGAAATGACGGCCTCGAACGAGTTGCAACCGAGTCCCGTATCGGTGCTTGACTCGTCCTTCTACAGGGACGAGTGGTGTTCACCTTCCCCAATCACAAAACGCTGCATTGATTACAAAGATCAAGCGGCGGAGTCGGAAGATGATGTGTGGAGTGCAGCATTTTGCAGCAGCGAAGCAAAGTCGGAGGAAGCAACAGAAGATAACGACTTCTCCTACGTGTCAGAAATCCTGCGCGCCTGCACTTACTTACCAGAAAACGGCGACGTTTTCGCGTTACTAGAGAAGCAGCAGATTCTAAAGGGAAAAGACACCTCAAAGGCCTCAACAATTCAGAGGCGGTTAGTGTTCGACACGGTCCGTGATATCTTGACCCGGCATCGTCGGCTTCCGCCGTGGAAGGTGGAGTTCTGTGGCGATGAGAGGCAGAGAGTATGGTCGGAGTTTCGGAGAATACGAGGAGAGAGGGAGGAAGAGGAGGAGGAGTGGTCGGAAAAGGACATGTTTGAGTTTATATGCGGGGTTTTGAGTAAGGACATGGCGGAGGATGTTGAGGGTTGGGGAGAATGGACGGTGGAGATTGGAGATATGGTGTTAGACATCGAACGGCTTGTGTTCAAGGATCTGATTGGCGAGACCATACGAGAGTTGGCCACGTGTGCATCCTCCCAACGTAACAGAGTTTTTGCTCTACGTAGGAAGCTCGTGTTTTGA 2298 0.5135 MTTSTIVREQNLEKHIHKQMGCMAGFLNIFDRHQILAGKRISSTKRLPAPQPDSSPESENHAASPARPSTPSPERVKKSPAREHTVTTVTTLPVLEFKEGTRSTWKFSREAPRLSLDSRTRTTSPSLSLSPNLTTENGGEKLSSEIQLQRRSTSSVVARLMGLEPLPGPDSDPGPNKKPELRRSASESRASRDLNRFFDAATGNGYQLNLKQVQQRQQYTQPQWIVSEGLNNNAGSDPAEQGARNNNNAKREKNYNNNARNRGVVTMVQKKSFFDSADFFPEVPKRSVSIYGEIERRLRMRGIDEPSKDLETLKHILEALQLKGLLHSNNHANRSNCNNHYNINDIHNQNHMNFVLDGGRTKNDSPIVVIKPVRSNRTGSDSPTSSFRSSPRTRRNERQPEFDRRSRNAKSPPLCRSPNRRNVAANAAENHHHNRVNVNDGFDSRKVSPVQSPRVNSGRNTPVHSPRMRKPIDQKEEKLLTVAEDESSTVSESSFSTSSHTDTERYRLEEYKEGRNLLDRCDKLLNSIAEMTASNELQPSPVSVLDSSFYRDEWCSPSPITKRCIDYKDQAAESEDDVWSAAFCSSEAKSEEATEDNDFSYVSEILRACTYLPENGDVFALLEKQQILKGKDTSKASTIQRRLVFDTVRDILTRHRRLPPWKVEFCGDERQRVWSEFRRIRGEREEEEEEWSEKDMFEFICGVLSKDMAEDVEGWGEWTVEIGDMVLDIERLVFKDLIGETIRELATCASSQRNRVFALRRKLVF 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30219g00034 765 PANTHER LONGIFOLIA PROTEIN 4 67 IPR033334 GO:0051513
Stsc30219g00034 765 MobiDBLite consensus disorder prediction 391 410 - -
Stsc30219g00034 765 MobiDBLite consensus disorder prediction 47 67 - -
Stsc30219g00034 765 Pfam Domain of unknown function (DUF4378) 598 740 IPR025486 -
Stsc30219g00034 765 MobiDBLite consensus disorder prediction 484 501 - -
Stsc30219g00034 765 MobiDBLite consensus disorder prediction 444 463 - -
Stsc30219g00034 765 MobiDBLite consensus disorder prediction 228 256 - -
Stsc30219g00034 765 MobiDBLite consensus disorder prediction 113 194 - -
Stsc30219g00034 765 MobiDBLite consensus disorder prediction 357 504 - -
Stsc30219g00034 765 MobiDBLite consensus disorder prediction 117 156 - -
Stsc30219g00034 765 MobiDBLite consensus disorder prediction 466 483 - -
Stsc30219g00034 765 MobiDBLite consensus disorder prediction 375 390 - -
Stsc30219g00034 765 MobiDBLite consensus disorder prediction 175 194 - -
Stsc30219g00034 765 MobiDBLite consensus disorder prediction 41 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30219g00034 Stsc-Chr30219 175493 178599 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30219g00034 452 765 TRM (TON1 Recruiting Motif) Superfamily AT3G63430 43.385 5.87e-69 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30219g00034 - - lang:109346664 670.618