Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30219g00021 ATGGACCCTTACAAAGAGAGAATTAAGACTGGGTGCCATAAAATCCTGGATGGAATAAATTCAATGTCTTTGGTGAATTTAGATGACCAGCAAGTCCATTCCTTGGTAATGATGAGAGAAATTGCACGCGGGGTTGTCGATGATCAAAATAGGAAGGTGACTAGGAATGATGTGGTTAGTGCCTTGCGCCGCAGCATTGAGAAAATGGTGTATGCATCCAGGGATATCATTCAATTATTGAGTAGGATGTCTTATGAAGGCTTGGATGATCAACAGATTAATTTAGTGTTGAGGATGAAAGAAATTGCACGTCGGATTATTGATAAACAGCCGAGAGTTGCAATTACTAGGCCTGATTTACTTGTAGAACAAGTTGCGTTTTTGGATGAAGGGATGAGAGATAGTCCTGGAGTTGAGGTGAGCAAGATCTGCAATGGGGATGCTCTGATTGATGGGGCTCAAAGCATGACTAATGATGATGATGTGTTAGATGTGGAACATGTTTTAGGATTTGAAAATGGGATGAATGACGCACGGGAGTCTCTATTGCCGTCATGCTTCCAGCAATTTCTTCTGTGGCCTCCCGACGATTGTATCACTTTAGACTGGGTTCAGGATATGATGTCCACATTTGAGCACACTTCACGTGAGATGTTGCCATCTGCATTTTGCCATGTTGTGCCAACCATTTTGGTGGATAAATTGACAGATGCTGCTTCCAGTATTTTACGTGAGGAAGAAAATTGTGTGGAGGTTGACTGTGAAGGTGAAGATTCAAGGGTCATTGTAGTAGGCGATATACATGGGCAGTTTCATGATTTATTGTCACTTTTCAAGCATGCAGGAATGCCCTCTGAGAACCAGTTTTATGTTTTCAATGGGAATTATGTAGGTAAAGGTGCTTGGGGCATTGAAGTACTTTTGGTCTTGCTAGCATGGAAGGTGTTGATGCCTCACAGAATATATCTGCTTCGTGGAAATAATGAATCGAGATATTGCAAAGGAAGGTATGGTTTTGAGAAGGAAGTATGGACCAAATATGGCGATCAAGGAGAAGATGTATACTACAAATTTTTAGAGTGCTTCAATGTGCTTCCGTTAGCTTCAGTTATAGCAAACTGTGTTTATACTACTCACGGAGGGCTTTTCCGTAGCACACATTCTGCTCCTTCACGAAAGTCAAAACATCAGAAGACACATAGGGTGGATCTTGGTTCTTTGGCTGAGTTATCTGAAGTTAAAAGAGCTTGTATTGATTCCCCTTATGAAGGTTCTAATGTATTATTGAGTGACATCCTCTGGTCAAAACCATCTAAAAGGATTGGTCTGAGGGAGAATACAGGTCGAAAATATGGTTTATGGTGGGGTCCTGATTGCACCGAGGCTTTCTTAAAACAACACAATTTAAAGCTGATCATCAGATCACATGAAGGGCCTGATGCAAGGGCTGGTCAGGATGATTTTGGGAACATGATGATTGGATATAGCTTGGATCACGATGTAGAATCAGGAAAGCTATATACACTTTTTAGTGCTCCAGACTACCCTCAGGCCTCAACCTCTGCCTTCTGTGCTTCTCAAAGACTGTATCCAGGTGGCCCGGGACCCTCTTTCGACTTCAGTATGTTGGGCATACACAATGGCCCGTCTTGGAGCGTTGAGCTTCTAGATGGTTCAGGTGGCACTCAGGTTATGCAGGTTCCAAGGGCCCCCATGGTGGAAGGCTTGCCACTTCCTCCTAACATACTGGTACATTTATCACGTGACTATCAGCATCTTCGATAA 1785 0.428 MDPYKERIKTGCHKILDGINSMSLVNLDDQQVHSLVMMREIARGVVDDQNRKVTRNDVVSALRRSIEKMVYASRDIIQLLSRMSYEGLDDQQINLVLRMKEIARRIIDKQPRVAITRPDLLVEQVAFLDEGMRDSPGVEVSKICNGDALIDGAQSMTNDDDVLDVEHVLGFENGMNDARESLLPSCFQQFLLWPPDDCITLDWVQDMMSTFEHTSREMLPSAFCHVVPTILVDKLTDAASSILREEENCVEVDCEGEDSRVIVVGDIHGQFHDLLSLFKHAGMPSENQFYVFNGNYVGKGAWGIEVLLVLLAWKVLMPHRIYLLRGNNESRYCKGRYGFEKEVWTKYGDQGEDVYYKFLECFNVLPLASVIANCVYTTHGGLFRSTHSAPSRKSKHQKTHRVDLGSLAELSEVKRACIDSPYEGSNVLLSDILWSKPSKRIGLRENTGRKYGLWWGPDCTEAFLKQHNLKLIIRSHEGPDARAGQDDFGNMMIGYSLDHDVESGKLYTLFSAPDYPQASTSAFCASQRLYPGGPGPSFDFSMLGIHNGPSWSVELLDGSGGTQVMQVPRAPMVEGLPLPPNILVHLSRDYQHLR 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30219g00021 594 SMART pp2a_7 227 536 IPR006186 GO:0016787
Stsc30219g00021 594 Pfam Calcineurin-like phosphoesterase 260 479 IPR004843 GO:0016787
Stsc30219g00021 594 SUPERFAMILY Metallo-dependent phosphatases 222 517 IPR029052 -
Stsc30219g00021 594 Gene3D - 210 529 IPR029052 -
Stsc30219g00021 594 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 34 518 - -
Stsc30219g00021 594 PRINTS Serine/threonine phosphatase family signature 505 521 IPR006186 GO:0016787
Stsc30219g00021 594 PRINTS Serine/threonine phosphatase family signature 360 386 IPR006186 GO:0016787
Stsc30219g00021 594 PRINTS Serine/threonine phosphatase family signature 411 438 IPR006186 GO:0016787
Stsc30219g00021 594 PRINTS Serine/threonine phosphatase family signature 290 317 IPR006186 GO:0016787
Stsc30219g00021 594 PRINTS Serine/threonine phosphatase family signature 260 287 IPR006186 GO:0016787
Stsc30219g00021 594 PRINTS Serine/threonine phosphatase family signature 323 347 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30219g00021 Stsc-Chr30219 117565 121995 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30219g00021 191 471 Calmodulin-binding Proteins AT5G63870 52.234 4.43e-99 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30219g00021 K04460 - qsa:O6P43_002566 776.163