Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30219g00020 ATGGACCCTTACAAAGAGAGAATTAAGACTGGGTGCCATAAAATCCTGGATGGAATAAATTCAATGTCTTTGGTGAATTTAGATGACCAGCAAGTCCATTCCTTGGTAATGATGAGAGAAATTGCACGCGGGGTTGTCGATGATCAAAATAGGAAGGTGACTAGGAATGATGTGGTTAGTGCCTTGCGCCGCAGCATTGAGAAAATGGTGTATGCATCCAGGGATATCATTCAATTATTGAGTAGGATGTCTTATGAAGGCTTGGATGATCAACAGATTAATTTAGTGTTGAGGATGAAAGAAATTGCACGTCGGATTATTGATAAACAGCCGAGAGTTGCAATTACTAGGCCTGATTTACTTGTAGAACAAGTTGCGTTTTTGGATGAAGGGATGAGAGATAGTCCTGGAGTTGAGGTGAGCAAGATCTGCAATGGGGATGCTCTGATTGATGGGGCTCAAAGCATGACTAATGATGATGATGTGTTAGATGTGGAACATGTTTTAGGATTTGAAAATGGGATGAATGACGCACGGGAGTCTCTATTGCCGTCATGCTTCCAGCAATTTCTTCTGTGGCCTCCCGACGATTGTATCACTTTAGACTGGGTTCAGGATATGATGTCCACATTTGAGCACACTTCACGTGAGATGTTGCCATCTGCATTTTGCCATGTTGTGCCAACCATTTTGGTGGATAAATTGACAGATGCTGCTTCCAGTATTTTACGTGAGGAAGAAAATTGTGTGGAGGTTGACTGTGAAGGTGAAGATTCAAGGGTCATTGTAGTAGGCGATATACATGGGCAGTTTCATGATTTATTGTCACTTTTCAAGCATGCAGGAATGCCCTCTGAGAACCAGTTTTATGTTTTCAATGGGAATTATGTAGGTAAAGGTGCTTGGGGCATTGAAGTACTTTTGGTCTTGCTAGCATGGAAGGTGTTGATGCCTCACAGAATATATCTGCTTCGTGGAAATAATGAATCGAGATATTGCAAAGGAAGGTATGGTTTTGAGAAGGAAGTATGGACCAAATATGGCGATCAAGGAGAAGATGTATACTACAAATTTTTAGAGTGCTTCAATGTGCTTCCGTTAGCTTCAGTTATAGCAAACTGTGTTTATACTACTCACGGAGGGCTTTTCCGTAGCACACATTCTGCTCCTTCACGAAAGTCAAAACATCAGAAGACACATAGGGTGGATCTTGGTTCTTTGGCTGAGTTATCTGAAGTTAAAAGAGCTTGTATTGATTCCCCTTATGAAGGTTCTAATGTATTATTGAGTGACATCCTCTGGTCAAAACCATCTAAAAGGATTGGTCTGAGGGAGAATACAGGTCGAAAATATGGTTTATGGTGGGGTCCTGATTGCACCGAGGCTTTCTTAAAACAACACAATTTAAAGCTGATCATCAGATCACATGAAGGGCCTGATGCAAGGGCTGGTCAGGATGATTTTGGGAACATGATGATTGGATATAGCTTGGATCACGATGTAGAATCAGGAAAGCTATATACACTTTTTAGTGCTCCAGACTACCCTCAGTTTGGTCAGAAGAGATATAACAACGAAGGAGCATATGCAATATTGCTGTCTCCAGATTTTGCAAGTCCTTCCTTTCTCTCATTCAAAGCTGCAGAAAGACCAATGGTGGATCCTTATGTTGCTCTTGATGCTGATGAGATGGACTTGCATGCCCTAAATTCTTCCCAAACAGCCTCAACCTCTGCCTTCTGTGCTTCTCAAAGACTGTATCCAGGTGGCCCGGGACCCTCTTTCGACTTCAGTATGTTGGGCATACACAATGGCCCGTCTTGGAGCGTTGAGCTTCTAGATGGTTCAGGTGGCACTCAGGTTATGCAGGTTCCAAGGGCCCCCATGGTGGAAGGCTTGCCACTTCCTCCTAACATACTGGAGCCGCACCGGTCTGCATACAAGTATTTGTTTGAGCTGGTCGGTGCTTTGAAACACGTGGTCGTAACAAGGGAGGCCGAGAACAGGGCCCATGTGTCAGCATTGCGAAGCAGAGCCAAGAAACGAAAGGGTAAAGGGTAG 2061 0.4352 MDPYKERIKTGCHKILDGINSMSLVNLDDQQVHSLVMMREIARGVVDDQNRKVTRNDVVSALRRSIEKMVYASRDIIQLLSRMSYEGLDDQQINLVLRMKEIARRIIDKQPRVAITRPDLLVEQVAFLDEGMRDSPGVEVSKICNGDALIDGAQSMTNDDDVLDVEHVLGFENGMNDARESLLPSCFQQFLLWPPDDCITLDWVQDMMSTFEHTSREMLPSAFCHVVPTILVDKLTDAASSILREEENCVEVDCEGEDSRVIVVGDIHGQFHDLLSLFKHAGMPSENQFYVFNGNYVGKGAWGIEVLLVLLAWKVLMPHRIYLLRGNNESRYCKGRYGFEKEVWTKYGDQGEDVYYKFLECFNVLPLASVIANCVYTTHGGLFRSTHSAPSRKSKHQKTHRVDLGSLAELSEVKRACIDSPYEGSNVLLSDILWSKPSKRIGLRENTGRKYGLWWGPDCTEAFLKQHNLKLIIRSHEGPDARAGQDDFGNMMIGYSLDHDVESGKLYTLFSAPDYPQFGQKRYNNEGAYAILLSPDFASPSFLSFKAAERPMVDPYVALDADEMDLHALNSSQTASTSAFCASQRLYPGGPGPSFDFSMLGIHNGPSWSVELLDGSGGTQVMQVPRAPMVEGLPLPPNILEPHRSAYKYLFELVGALKHVVVTREAENRAHVSALRSRAKKRKGKG 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30219g00020 686 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 34 567 - -
Stsc30219g00020 686 Pfam Calcineurin-like phosphoesterase 260 479 IPR004843 GO:0016787
Stsc30219g00020 686 Gene3D - 195 583 IPR029052 -
Stsc30219g00020 686 SUPERFAMILY Metallo-dependent phosphatases 222 555 IPR029052 -
Stsc30219g00020 686 PRINTS Serine/threonine phosphatase family signature 323 347 IPR006186 GO:0016787
Stsc30219g00020 686 PRINTS Serine/threonine phosphatase family signature 360 386 IPR006186 GO:0016787
Stsc30219g00020 686 PRINTS Serine/threonine phosphatase family signature 290 317 IPR006186 GO:0016787
Stsc30219g00020 686 PRINTS Serine/threonine phosphatase family signature 411 438 IPR006186 GO:0016787
Stsc30219g00020 686 PRINTS Serine/threonine phosphatase family signature 505 521 IPR006186 GO:0016787
Stsc30219g00020 686 PRINTS Serine/threonine phosphatase family signature 260 287 IPR006186 GO:0016787
Stsc30219g00020 686 SMART pp2a_7 227 549 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30219g00020 Stsc-Chr30219 117565 121995 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30219g00020 191 471 Calmodulin-binding Proteins AT5G63870 52.234 2.06e-98 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30219g00020 K04460 - qsa:O6P43_002566 943.34