Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30219g00014 ATGGCGTACCAGTCCCCCGATCACGAACCAGATTCCGAATCCAAGAAAGATGTCCGCCTCTACAACCCATACAAGGACCTCGAGGTTCCAATTAGAAACCTCTACCAGCTCCCAACCTCGCCGGAGTACCTCTTCGTCGAGGAGGCTCAACGTAAGCGTCGATCCTGGGGTGAAAACCTCACGTTCTACACTGGCTGCGGTTACCTCGGCGGCGCCATCGGTGGCGGCGCTCGAGGCTTAGTAGACGGCGTCAAATCCTTCGAGGCCGGCGACACGCTCAAGCTCCGGATCAACCGTATTCTGAACTCTTCCGGCCACGCTGGCCGTACTTGGGGGAACCGTCTCGGAGTCATAGGGCTGCTGTATTCCGGGATTGAGAGCGCGATGATGGAGACGAGAGACACCGACGACGTGTGGAACAGCGTGGTGGCGGGGCTCGGCACCGGAGCGCTGTATAGGATTTCGGGAGGCGTGAGATCTGCGGCTGTGGCAGGTGCAGTCGGAGTAGTGGTGGCCGGAACCGTCGTGACGGCGAAACAGGCTATGAAACGCTACGCACATCTTGCGTGA 570 0.5947 MAYQSPDHEPDSESKKDVRLYNPYKDLEVPIRNLYQLPTSPEYLFVEEAQRKRRSWGENLTFYTGCGYLGGAIGGGARGLVDGVKSFEAGDTLKLRINRILNSSGHAGRTWGNRLGVIGLLYSGIESAMMETRDTDDVWNSVVAGLGTGALYRISGGVRSAAVAGAVGVVVAGTVVTAKQAMKRYAHLA 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30219g00014 189 Pfam Tim17/Tim22/Tim23/Pmp24 family 62 172 - -
Stsc30219g00014 189 PANTHER TIM23 32 176 IPR045238 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30219g00014 Stsc-Chr30219 74941 75886 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30219g00014 4 184 Chloroplast and Mitochondria Gene Families AT1G17530 62.295 4.80e-75 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30219g00014 K17794 - gmx:100813158 263.077