Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30217g00037 ATGGCAGCGTGCTTCTTTGGGGAAATGAGTTACGTGAAACCACCAATGTCTGGTGTCATAAAAGGGATGTTCGTTCCAAAACTGAGTGGTCAAGGTGCCACTGGAGATGCCATTGCCCTTTTGGGTGCCCTTATCATGCCGCACAACCTGTTCCTACACTCTGCTCTGGTGCTGTCTAGGAAAATACCCAATTCAGTTCGTGGCATCAATGAAGCGTGTAGATATTTTCTGATAGAGAGTGGGTTCGCACTGTTTGTGGCATTTCTAATCAACGTTGCAGTAATTTCTGTGTCTGGCACTGTTTGCTCATCTTCAAATCTTTCTTCACAAAACGCTGCTCACTGCTCCGATCTCACCCTTAACTCTGCTTCCTTTCTTCTCAAGAATGTGTTGGGAAGGTCGAGTTCAACGATTTATGCGATAGCACTGTTAGCTTCAGGACAAAGTTCCGCCATTACAGGAACCTATGCAGGACAGTACATTATGCAGGGTTTCTTGGACTTAAAGATGAAAAGATGGATTAGGAACTTGATGACTAGGACCATTGCCATAGCACCAAGCCTTGTTGTCTCCATTATTGGTGGCTCCTCCGGTGCTGGTCGCCTAATCGTCATCGCATCGATGATACTTTCTTTTGAGCTTCCATTCGCTTTAATTCCACTCCTTAAGTTTAGTAGCAGCAGTACCAAGATGGGACCTCACAAGAACTCTATGATAATCATTGTGATATCATGGATCCTAGGAGTGGGGATCATAGGCATCAATGTGTACTACCTGGTCACTGCATTCGTGGGTTGGCTAATGCATAATAGTTTGCCAATGGTGGGAAAAGTGTTCATTGGGATCATAGTGTTTCCTCTGATGGGAATCTATGTAGGCTCAGTTATATACCTAACATTCAGAAAAGACACTGTTCAGACATATATTGAGACCAAGAATAACACAGCAATGCAAACCCATGTGGAAAAGGGCTTCATGAATCCCAACGGCAATGGTGAGTTAGAGTTGAACCATGGCCCTATCAGAGAAGATTTAGCTGATATCCCACTACCTGAATAA 1059 0.441 MAACFFGEMSYVKPPMSGVIKGMFVPKLSGQGATGDAIALLGALIMPHNLFLHSALVLSRKIPNSVRGINEACRYFLIESGFALFVAFLINVAVISVSGTVCSSSNLSSQNAAHCSDLTLNSASFLLKNVLGRSSSTIYAIALLASGQSSAITGTYAGQYIMQGFLDLKMKRWIRNLMTRTIAIAPSLVVSIIGGSSGAGRLIVIASMILSFELPFALIPLLKFSSSSTKMGPHKNSMIIIVISWILGVGIIGINVYYLVTAFVGWLMHNSLPMVGKVFIGIIVFPLMGIYVGSVIYLTFRKDTVQTYIETKNNTAMQTHVEKGFMNPNGNGELELNHGPIREDLADIPLPE 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30217g00037 352 Pfam Natural resistance-associated macrophage protein 1 237 IPR001046 GO:0016020|GO:0030001|GO:0046873
Stsc30217g00037 352 PRINTS Natural resistance-associated macrophage protein signature 37 60 IPR001046 GO:0016020|GO:0030001|GO:0046873
Stsc30217g00037 352 PRINTS Natural resistance-associated macrophage protein signature 175 192 IPR001046 GO:0016020|GO:0030001|GO:0046873
Stsc30217g00037 352 PRINTS Natural resistance-associated macrophage protein signature 147 166 IPR001046 GO:0016020|GO:0030001|GO:0046873
Stsc30217g00037 352 PRINTS Natural resistance-associated macrophage protein signature 207 226 IPR001046 GO:0016020|GO:0030001|GO:0046873
Stsc30217g00037 352 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 1 309 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30217g00037 Stsc-Chr30217 250571 253302 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30217g00037 1 351 Inorganic Solute Cotransporters AT1G15960 58.405 4.90e-141 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30217g00037 K21398 - gmx:100787785 590.497