Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30217g00031 ATGGCCATGGGGGATTCAAAGGTAGAAACAATTGCGCGCTTAGCTCAATGGAAAATCGATAACTTCGGTCCCTGTTCCTACAAGAAATCTGACCCGTTCAAGATCGGAATCTGGAACTGGTACATAGCAATAGAGAGGAACAGGTACCTGTACATACACCTGTTTCCAGAAGCTTCTCGTGTCTCCAAAGAGCAGCCACCCGTTGCTCGTTTCATTCTTCGAGTCTCCAATGCTGGCTCTTCCCGCAGGTTCTATATTTCCCCTGTCCATGAAAGGATACTTAGGACATATGATGACTTTGTCTGGCCTGTTGATACTACATTCCTTGGTCGCTTCATTATTGATGTCGAATTTCTTGACTTGAAGATATGCCCTCTGAATGGTGGGGAAGCTACTTCTATATGGCCATCTGAGGGAAAATTGCAATCCATTGCATCTCAAAGTACACTCACTTGCCTCTCACGCATGCTTGATGAGGCTATACATGCTGACCTAACCATTATTACCGCCGATGGTACACTGAAAGCTCACAAGGCAATCTTGTCTACAAGTTCACCGGTGTTCCAGACCAATAAATATGACATAACTGGTCTCAAAGAAGTGTGCGAAGACAGTCTGCTGGAAGATCTTAACTCTGGAAACGTTCTCGAGAGGCTCAACGAGGCTTGGCTTTATCAATTACACAAGTTAAAGAAAGGATGCTTGACCTTCTTATTTGAATTCGGCAAGATATATGATGTTAGAGACGAAGTAAACAACTTTTTTCAGCATGCCGATAGGGAGCTAATGATGGAGATGTTTCAGGAAGTGCTCACAGTTTGGAGACCGTAA 831 0.4404 MAMGDSKVETIARLAQWKIDNFGPCSYKKSDPFKIGIWNWYIAIERNRYLYIHLFPEASRVSKEQPPVARFILRVSNAGSSRRFYISPVHERILRTYDDFVWPVDTTFLGRFIIDVEFLDLKICPLNGGEATSIWPSEGKLQSIASQSTLTCLSRMLDEAIHADLTIITADGTLKAHKAILSTSSPVFQTNKYDITGLKEVCEDSLLEDLNSGNVLERLNEAWLYQLHKLKKGCLTFLFEFGKIYDVRDEVNNFFQHADRELMMEMFQEVLTVWRP 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30217g00031 276 CDD BTB_POZ_ZBTB_KLHL-like 162 190 - -
Stsc30217g00031 276 Gene3D Potassium Channel Kv1.1; Chain A 143 190 IPR011333 -
Stsc30217g00031 276 ProSiteProfiles BTB domain profile. 163 190 IPR000210 GO:0005515
Stsc30217g00031 276 PANTHER OS08G0495500 PROTEIN-RELATED 3 189 IPR044714 -
Stsc30217g00031 276 CDD MATH 17 103 IPR002083 GO:0005515
Stsc30217g00031 276 Gene3D Potassium Channel Kv1.1; Chain A 191 239 IPR011333 -
Stsc30217g00031 276 SUPERFAMILY POZ domain 146 239 IPR011333 -
Stsc30217g00031 276 Pfam BTB/POZ domain 156 189 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30217g00031 Stsc-Chr30217 225994 228974 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Stsc30217g00031 BTB 0.00034 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30217g00031 K10523 - cave:132189340 453.751