Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30217g00014 ATGGAGGTTGTTGATGATGGTAGAAAGATTCAACAACAACAACAACATTTTCATGTGTTGGCAGTTGATGATAGTGTCATTGATAGGAAGCTCTTGGAGAGGCTCCTAAGAGATTCTTCATGCAAAGTTACCTGCGTGGAGTCTGGTGACAAGGCTCTGAAATATCTTGGTCTTGTTAATGATGATGATGACCACCATCAAAACAATAATAATAATACTTCTTCATCAACCTCTTCAGAATCTTCATCATCATCTTCTAATTCTCCTCCTCAGCCATTACAGCAAGAGGGAATGAAAGTGAATTTGATCATGACGGATTATTGCATGCCTGGGATAAGTGGCTATGATTTACTTAAACGAGTCAAGGGATCTTCTTGGAAAGATGTTCCAGTTGTGATTATGTCATCAGAAAATGTACCTTCCAGAATCAGCATGTGCTTGGAAGGAGGAGCAGAAGAGTTTCTATTGAAACCTCTACAGTCAGCTGATTTAAAGAAGCTCCAACCTTACTTTGTGAAACCACTATTTGATCATAATAATTCAAGTGAAGAAGAAGAATCTGCTAATAGTTCTATAGATTTAGAAAATGACAATAATAGTCTCATAAGCAACAATAACAGGATTATTAGCAATAATAATAATATTAATAAAAGGAAGGCTTCTATGTCTTCTAACGAGCCTTCAGAAAAATCAAGACTCAAAATCAAAGGGTTAAAAGTAGTGGTGTAA 729 0.3608 MEVVDDGRKIQQQQQHFHVLAVDDSVIDRKLLERLLRDSSCKVTCVESGDKALKYLGLVNDDDDHHQNNNNNTSSSTSSESSSSSSNSPPQPLQQEGMKVNLIMTDYCMPGISGYDLLKRVKGSSWKDVPVVIMSSENVPSRISMCLEGGAEEFLLKPLQSADLKKLQPYFVKPLFDHNNSSEEEESANSSIDLENDNNSLISNNNRIISNNNNINKRKASMSSNEPSEKSRLKIKGLKVVV 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30217g00014 242 MobiDBLite consensus disorder prediction 60 94 - -
Stsc30217g00014 242 Pfam Response regulator receiver domain 95 166 IPR001789 GO:0000160
Stsc30217g00014 242 SUPERFAMILY CheY-like 17 166 IPR011006 -
Stsc30217g00014 242 ProSiteProfiles Response regulatory domain profile. 18 172 IPR001789 GO:0000160
Stsc30217g00014 242 MobiDBLite consensus disorder prediction 69 94 - -
Stsc30217g00014 242 PANTHER TWO-COMPONENT RESPONSE REGULATOR 17 214 IPR045279 GO:0009736
Stsc30217g00014 242 CDD REC_typeA_ARR 19 167 - -
Stsc30217g00014 242 Gene3D - 18 224 - -
Stsc30217g00014 242 SMART REC_2 17 168 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30217g00014 Stsc-Chr30217 127161 130802 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30217g00014 14 173 Response Regulator Gene Family AT3G57040 55.901 1.34e-56 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Stsc30217g00014 Response_reg 7.7e-14 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30217g00014 K14492 - gmx:100786187 278.87