Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc30217g00010 | ATGGCAGAGCGTGTGCTCCTCACAAATCCTTCATTCACTTTACCATCTCAACCGTCTCCAACAACCACAATGGCTTCCACCGCCACTGCCGCAATCGCCGCCGCACGCATTATTCCCTCCGCCACTGCACTCTCCTCTTCATCTTCCCGCTCCTTCTTCTCCTCCTCTTCCACTTCTCGTTCCTCGCTCAAATGCCTCCACCTTCGCTCCTCTCCTCGCATTTCTCACCTCTTCGTCAATCAGCGAAGAACTGAGGTTCGTGTTTCGAGTGGAGGATATGCAACGGTTTCTGCTCCGAAGTCGTTTGCTTCTGATCCTGATCAGCTGAAGAGTGCTAGAGAAGATATCAGGGAGCTTCTAAGGACGAAATTCTGCCATCCGATTCTGATTCGCTTGGGATGGCATGATGCTGGTACCTACAATAAGAATATTGAGGAATGGCCACAGAGAGGTGGTGCTAATGGTAGTTTAAGATTTGAAGTTGAGCTGAAACATGCAGCCAATGCTGGACTTGTGAATGCATTGAAGCTTCTTCAGCCAATCAAAGACAAATACACTGGTGTGACATATGCAGACTTATTTCAGTTGGCTGGTGCTACTGCTGTTGAGGAAGCCGGAGGCCCAAAAATCCCTATGAAATATGGAAGAGTGGATGTCTCAGCACCTGAACAATGTCCTGAGGAAGGCAGACTTCCAGATGCTGGTCCTCCCTCACCGGCTGATCATTTGCGTCAAGTTTTCTATAGAATGGGTTTGAATGACAAGGAAATTGTTGCATTATCTGGTGCGCACACGCTGGGAAGGTCCAGACCTGAGCGTAGTGGCTGGGGCAAGCCTGAGACAAAATATACAAAAGATGGACCAGGAGCACCTGGAGGACAATCCTGGACAGTACAATGGTTGAAGTTTGACAACTCATACTTCAAGGACATCAAGGAAAAAAGGGATGAAGATTTATTGGTATTGCCAACAGATGCTGCTCTTTTTGAGGATCCATCCTTCAAGGTTTATGCTGAGAAGTATGCTGAAGATCAAGTAGCATTCTTCAATGATTATGCTGAAGCCCATGCCAAACTAAGCAACCTTGGTGCAAAATTTGATCCTCCAGAGGGCATAGTATTAGATTCTTCTCCAAAGCCACAAGCAGAGAAGTTTGAAGCGGCCAAGTACTCATCTGGAAAGGATTAA | 1188 | 0.4705 | MAERVLLTNPSFTLPSQPSPTTTMASTATAAIAAARIIPSATALSSSSSRSFFSSSSTSRSSLKCLHLRSSPRISHLFVNQRRTEVRVSSGGYATVSAPKSFASDPDQLKSAREDIRELLRTKFCHPILIRLGWHDAGTYNKNIEEWPQRGGANGSLRFEVELKHAANAGLVNALKLLQPIKDKYTGVTYADLFQLAGATAVEEAGGPKIPMKYGRVDVSAPEQCPEEGRLPDAGPPSPADHLRQVFYRMGLNDKEIVALSGAHTLGRSRPERSGWGKPETKYTKDGPGAPGGQSWTVQWLKFDNSYFKDIKEKRDEDLLVLPTDAALFEDPSFKVYAEKYAEDQVAFFNDYAEAHAKLSNLGAKFDPPEGIVLDSSPKPQAEKFEAAKYSSGKD | 395 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc30217g00010 | 395 | CDD | ascorbate_peroxidase | 97 | 367 | - | - | |
Stsc30217g00010 | 395 | Pfam | Peroxidase | 113 | 344 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Stsc30217g00010 | 395 | SUPERFAMILY | Heme-dependent peroxidases | 106 | 365 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Stsc30217g00010 | 395 | FunFam | L-ascorbate peroxidase T, chloroplastic | 234 | 357 | - | - | |
Stsc30217g00010 | 395 | PANTHER | THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED | 84 | 366 | IPR044831 | GO:0004601|GO:0034599 | |
Stsc30217g00010 | 395 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 256 | 266 | IPR019793 | - | |
Stsc30217g00010 | 395 | PRINTS | Plant ascorbate peroxidase signature | 206 | 218 | IPR002207 | GO:0004601|GO:0006979|GO:0020037 | |
Stsc30217g00010 | 395 | PRINTS | Plant ascorbate peroxidase signature | 105 | 125 | IPR002207 | GO:0004601|GO:0006979|GO:0020037 | |
Stsc30217g00010 | 395 | PRINTS | Plant ascorbate peroxidase signature | 187 | 205 | IPR002207 | GO:0004601|GO:0006979|GO:0020037 | |
Stsc30217g00010 | 395 | PRINTS | Plant ascorbate peroxidase signature | 325 | 349 | IPR002207 | GO:0004601|GO:0006979|GO:0020037 | |
Stsc30217g00010 | 395 | PRINTS | Plant ascorbate peroxidase signature | 126 | 141 | IPR002207 | GO:0004601|GO:0006979|GO:0020037 | |
Stsc30217g00010 | 395 | FunFam | L-ascorbate peroxidase S chloroplastic/mitochondrial | 112 | 236 | - | - | |
Stsc30217g00010 | 395 | Gene3D | - | 112 | 365 | - | - | |
Stsc30217g00010 | 395 | PRINTS | Haem peroxidase superfamily signature | 296 | 311 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Stsc30217g00010 | 395 | PRINTS | Haem peroxidase superfamily signature | 126 | 140 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Stsc30217g00010 | 395 | PRINTS | Haem peroxidase superfamily signature | 256 | 271 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Stsc30217g00010 | 395 | PRINTS | Haem peroxidase superfamily signature | 206 | 218 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Stsc30217g00010 | 395 | PRINTS | Haem peroxidase superfamily signature | 188 | 205 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Stsc30217g00010 | 395 | MobiDBLite | consensus disorder prediction | 263 | 291 | - | - | |
Stsc30217g00010 | 395 | ProSiteProfiles | Plant heme peroxidase family profile. | 188 | 373 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Stsc30217g00010 | 395 | Gene3D | Peroxidase, domain 2 | 234 | 357 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc30217g00010 | Stsc-Chr30217 | 88733 | 93556 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc30217g00010 | 188 | 365 | Peroxidase | AT4G17690 | 33.498 | 8.82e-18 | 81.6 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc30217g00010 | K00434 | - | gmx:100802238 | 645.195 |