Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30216g00004 ATGGAAATCCAATTTTCCTACGTATTCATCATCTCTATCCTTTTTGCAACAACCCTATGGCTAACAAAGAACCTAAAACAAAAAAGCCATAAACAGAAACTTCCACCAGGACCATGGAAGCTACCTCTCATTGGAAACCTCCATCAGCTAGCATCAGCAGGTTCTCTTCCACACCATGCTTTACAAAAGCTATCACTCAAATATGGTCCCATCATGCACCTAAAATTAGGTCAAGTTTCTGCTGTAGTTGTTTCATCAGCAGATGTTGCAAAAGAGATCATGAAAACAAATGATCATGCTTTTCTCCAAAGGCCAGAGTTTCATTCCATTGCAATCTTCACCTACGGTTTAAAAGATGTTGCTTTTGCTCAATATGGTGATTATTGGAGACAGATTAGGAAACTTTGCACTTTAGAGCTTCTAAGTTCCAAGAGGGTTAATTAA 444 0.3851 MEIQFSYVFIISILFATTLWLTKNLKQKSHKQKLPPGPWKLPLIGNLHQLASAGSLPHHALQKLSLKYGPIMHLKLGQVSAVVVSSADVAKEIMKTNDHAFLQRPEFHSIAIFTYGLKDVAFAQYGDYWRQIRKLCTLELLSSKRVN 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30216g00004 147 Gene3D Cytochrome P450 26 147 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30216g00004 147 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30216g00004 147 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30216g00004 147 Pfam Cytochrome P450 35 144 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30216g00004 147 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 10 147 - -
Stsc30216g00004 147 SUPERFAMILY Cytochrome P450 35 145 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30216g00004 Stsc-Chr30216 47560 48003 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30216g00004 7 146 Cytochrome P450 AT5G25120 45.000 8.26e-37 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30216g00004 - - gmx:100794503 178.718