Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30215g00026 ATGGCAGCAACAACAACACCCTCATCAGTGCGCGTTAAAGAAGCTCTGCTCGTCACGCCTTCTGACCCCACACCAACTGGGATTCTCCATCTCTCCGCTATCGACTCTCAGCTTTTTCTTCGCTTCACCGTCGAATACCTCTTTGTTTACAGACCACCCTCAGCCCTCCACCAGGCTTCCGTCGTGACACGTGTCAAGTCCGCATTGGCAAGAGCACTTGTTCCGTACTATCCCTTTTCCGGCAGAGTACGGCCTAGGGCTGACGTCACAGGCGGGCTTGAGGTCGTGTGCCGCGGACAAGGCGCGCTCTTCATCGAGGCTTTCTCTGATGTTTACACTGCTAAAGATTTCGACAAGGCTCCGAAAACGGTTACACAATGGAGGAAGCTCTTGTCGCTTTACGTTCCCGACGTTCTCAAAGGATCGCCGCCGCTCGTCGTTCAGCTCACCTGGCTTGCCGACGGAGCCGCCGCGGTTGGCGTCGGAATCAACCACGCACTCTGCGATGGCATAGGAAGCGCTGAATTTCTTAATTACTTCGCTAAATTAGCTTCCGGCCCGCGAGATTTTGATCCCAAGCCCAGGCCCGTCTGGGATCGTCACATCATGAACCCGCCGCCGTCCAAGAAGAACGACCGGGCTAAGGGTAACAGCCACGCTGAGTTTGCACGGGTGCCCGATCTCTGCGGGTTTATGAACAAGGTAACCACCGGGCTTAGGCCCACCTCCATTGTTTTCAACAAGAGGCGGATCAACGAGCTCAAGGGAATAGCCCGTTACTCGAGCGAGTCGTCGTCATCATCGTACACGTCTTTTGAGGTGATAGCGGCCCACGTGTGGAGGAGCTGGGCCCGGGCATTGGGCTTTCCACCGAACCAGCAACTAAAGATGCTGTTTAGCATTAACGTGCGGAACCGGGTGAAGCCGAACCTTCCAGAGGGGTATTATGGGAACGCGTTCGTTCTCGGGTGTGCACAGAGCAGTGCAAAGGAGCTTTCAGAGAAAGGAATCGGGTACGGGTCGGGCCTGGTGAAACGGGCCAAGGAGAGGGTGGATGGAGAGTACGTGAGGAGGGTGAGTGAGTTAGTTTCCGAGTGGAGGGCGAGTCCTGACCCGGTTGGTGTGCTCATAGTTTCTCAGTGGTCTCGTTTGGGCCTTGAGAGGGTTGAGTTTATGGGCCGGCCCATTCATGTTGGGCCCATATGCTGGGATAGATACTGCTTGTTTCTTCCGGTTAGGGATGAGGCGGAGAGTGTCAGGGTCGCCGTGGCTGTCCCTACCGCCGCCTTTGACAGTTACCACCGCTTTATTGGAGAATCCAATTTATGA 1329 0.5553 MAATTTPSSVRVKEALLVTPSDPTPTGILHLSAIDSQLFLRFTVEYLFVYRPPSALHQASVVTRVKSALARALVPYYPFSGRVRPRADVTGGLEVVCRGQGALFIEAFSDVYTAKDFDKAPKTVTQWRKLLSLYVPDVLKGSPPLVVQLTWLADGAAAVGVGINHALCDGIGSAEFLNYFAKLASGPRDFDPKPRPVWDRHIMNPPPSKKNDRAKGNSHAEFARVPDLCGFMNKVTTGLRPTSIVFNKRRINELKGIARYSSESSSSSYTSFEVIAAHVWRSWARALGFPPNQQLKMLFSINVRNRVKPNLPEGYYGNAFVLGCAQSSAKELSEKGIGYGSGLVKRAKERVDGEYVRRVSELVSEWRASPDPVGVLIVSQWSRLGLERVEFMGRPIHVGPICWDRYCLFLPVRDEAESVRVAVAVPTAAFDSYHRFIGESNL 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30215g00026 442 PANTHER ACYL TRANSFERASE 4 9 427 - -
Stsc30215g00026 442 MobiDBLite consensus disorder prediction 196 217 - -
Stsc30215g00026 442 Gene3D - 5 222 IPR023213 -
Stsc30215g00026 442 Gene3D - 233 436 IPR023213 -
Stsc30215g00026 442 Pfam Transferase family 9 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30215g00026 Stsc-Chr30215 208086 209705 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30215g00026 10 439 Monolignol Biosynthesis Gene Families AT5G48930 27.778 7.80e-47 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30215g00026 - - gmx:100803812 622.468