Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30215g00020 ATGTCGACACAACACGATTCTCGCTCCCTAAACTGGCACTACACGGAGCTAGACGACAAAGACCTCGAAATCCGCGGCAAAACACTCTTCTCCGTCATCCTCCTCTTCTCCATTATCATCCTCATCACCGTCCTCTTCCTCTACACCCGCTGGGTCTGCCGCTACAACCACCACCGCAATTCCTCCACCAACGCGCTCCACGCGCCGCCCTCATCACTTTCTTCTTCCCAGGGTTTGGACCCGGCATCGATCAAGAAACTTCCAATCATCCTCCACCAGGCGCCGTCGGAGCCCCACGGCGGCGCGTGGGAAGAGACGGAGTGTTGCATCTGCCTGGGAGAGTTCATCGACGGCGAGAAACTGAAGGGCTTCACTCAAACTTGA 384 0.5677 MSTQHDSRSLNWHYTELDDKDLEIRGKTLFSVILLFSIIILITVLFLYTRWVCRYNHHRNSSTNALHAPPSSLSSSQGLDPASIKKLPIILHQAPSEPHGGAWEETECCICLGEFIDGEKLKGFTQT 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30215g00020 127 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 29 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30215g00020 Stsc-Chr30215 160098 160564 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30215g00020 10 122 C3H Transcription Factor Family AT3G11110 36.134 3.32e-15 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30215g00020 - - aip:107623622 199.134