Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30214g00027 ATGCAAAGGCCTCATCATAGTCATGATTTCCAAATATCTCATCATAATGTGTCACTGAATATGCAAAAACCACCCTTGGCCTTGTCTAATTCATGTTCTTTGAATAAGAGGATGTGCAATACATTGGATAATCAAAATTTTCAATCCTCCTATTCAAAGTGCCATTGCTACAAAAAAAGGAAGAAGTTGCAGAAGGTGATTAGAGTGCCAGCTATTAGTTCAAAGACTGCTGATATTCCATCAGATGATTTTTCTTGGAGAAAATATGGACAGAAACCTATTAAGGGCTCTCCTCATCCTAGAGGTTATTACAAATGTACGAGCGTTAGCGGATGCCCTGCACGCAAACACGTGGAGCGTGCAGCAGACGATCCAAGCATGCTCGTTGTAACCTACGAAGGAGAACATAAACACTCATCAACACCTTAA 429 0.4009 MQRPHHSHDFQISHHNVSLNMQKPPLALSNSCSLNKRMCNTLDNQNFQSSYSKCHCYKKRKKLQKVIRVPAISSKTADIPSDDFSWRKYGQKPIKGSPHPRGYYKCTSVSGCPARKHVERAADDPSMLVVTYEGEHKHSSTP 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30214g00027 142 SUPERFAMILY WRKY DNA-binding domain 76 140 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc30214g00027 142 FunFam WRKY transcription factor 65 64 141 - -
Stsc30214g00027 142 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 38 140 IPR044810 GO:0003700
Stsc30214g00027 142 Pfam WRKY DNA -binding domain 82 138 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc30214g00027 142 ProSiteProfiles WRKY domain profile. 75 141 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc30214g00027 142 Pfam Plant zinc cluster domain 36 78 IPR018872 -
Stsc30214g00027 142 Gene3D WRKY domain 66 141 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc30214g00027 142 SMART WRKY_cls 80 140 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30214g00027 Stsc-Chr30214 208021 209965 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30214g00027 49 138 WRKY Transcription Factor Family AT2G24570 70.330 1.64e-45 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Stsc30214g00027 WRKY 5.3e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30214g00027 - - lja:Lj0g3v0162929.1 185.652