Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30214g00026 ATGATGAGTAGTATTCACCCACAAAAATTCTTAGTCTCAAGAACCTTACACATTTTTCTCTTATTCTTCTTAATCTCCCTTCTTTCTATTACCCACACGTCAGCACTACATAACACAAACAAAGGCCACAGAAACAAAAGTGTTGCCAAATCAGCTCCAATTGTAGCAGCAACATCTCCAACATCTCCACCTCTAGTTTTTGCAGATCAAAGGCTTCAATTAGTGTATCCAGTGATCCAAAAATTCAAGTCAACCATAACCTTAGATCCCTTAGGAGTTACAAAAACATGGGTGGGTTCAGATATTTGTAGCTACAAAGGTTTCTTTTGTGACACTCCACCATACAACAGTTCAGCCGTTGCCTTAGCCTCAATTGATTTCAACGGTTTCCAACTCTCTGCTCCTACCCTTGATGGATTCATAGATCAATTACCTGATATTGCTCTGTTCCATGCAAATACCAACAATTTTGGTGGAACAATCACACCCCAGATTTCAAACCTACCTTATCTCTATGAGCTTGATCTTAGTAACAATCAATTATCAGGTCCATTTCCTGTGGCTGTTCTTGGAATGGAAACGTTAACGTTTTTGGACATTCGGTTCAATTTGTTCTCTGGGGCAGTTCCACCACAGATTTTCACACAGAATCTTCAAGTTCTGTTCATCAACAACAACATATTCAATCAGAGTTTGCCTGATAACTTAGGATCCACTCATATCTTGTTGCTAACTTTGGCAAACAACAAGTTCAATGGTCCAATTCCAAGAAATCTTCCAAAGGCTTTGGCCACACTTACTGAAGTGTTGCTATTAAACAACCAGTTAACAGGCTGTTTGCCTTATGAGATTGGCTACCTTCAAATGGCAACGGTTTTTGACGTGGGGAATAACCAATTGACAGGTCCGTTGCCATTCTCATTGAGTTGTCTTGAGAAGGCTCAGATTCTCAACTTTGGTGGGAATTTGTTGTATGGAATGGTGCCTGAAGTTGTGTGTGCAGGGTTGATGGGCAATTTGGTAAATTTCTCACTGTCTGATAACTATTTCAATGCTGTGGGGCCCATTTGTAGGGTTTTGATTGAAAAGGGAGTTCTTGATGTTACAAAGAATTGCATTCCTGATCTTCCATTCCAAAGATCAATTCTTGAATGTGCTGAGTTCTTTGCACAACCAAGGATGTGTCCATTGATGTGGTATCATAGTTTCATCCCTTGCAAGCTTCATTTTCATAACACCCCACTTTCTTTCATTCCTTAG 1260 0.3984 MMSSIHPQKFLVSRTLHIFLLFFLISLLSITHTSALHNTNKGHRNKSVAKSAPIVAATSPTSPPLVFADQRLQLVYPVIQKFKSTITLDPLGVTKTWVGSDICSYKGFFCDTPPYNSSAVALASIDFNGFQLSAPTLDGFIDQLPDIALFHANTNNFGGTITPQISNLPYLYELDLSNNQLSGPFPVAVLGMETLTFLDIRFNLFSGAVPPQIFTQNLQVLFINNNIFNQSLPDNLGSTHILLLTLANNKFNGPIPRNLPKALATLTEVLLLNNQLTGCLPYEIGYLQMATVFDVGNNQLTGPLPFSLSCLEKAQILNFGGNLLYGMVPEVVCAGLMGNLVNFSLSDNYFNAVGPICRVLIEKGVLDVTKNCIPDLPFQRSILECAEFFAQPRMCPLMWYHSFIPCKLHFHNTPLSFIP 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30214g00026 419 Gene3D Ribonuclease Inhibitor 77 376 IPR032675 -
Stsc30214g00026 419 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 21 407 - -
Stsc30214g00026 419 SUPERFAMILY L domain-like 83 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30214g00026 Stsc-Chr30214 201206 202465 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30214g00026 62 392 Leucine-rich Repeat extension Gene Families AT3G24480 41.088 1.74e-81 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30214g00026 - - gmx:100789584 619.387