Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30214g00012 ATGCTATATAGAGGGGGAATGAGAACGCCGAATGCTCAGCAAATAGAACAGATTACTACTCAGTTAGGGAAATACGGCAAGATTGAAGGCAAAAATGTCTTTTATTGGTTCCAAAACCACAAAGCACGTGAGAGACAAAAGCAGAAGCGTAATAGTCTTGGACTTTCTCATACTCCTAGAACCCCGCCCACTGTTGCCACCGTCGTCGCTACGGCAACCACAACGATAGTTTCGTCGCCCACCTTTGCTCCTAGCTTAAGTTTTGAGACCTCAAGGGGAGAAGTAATTGAAAGAGATCATGAAGATAGTCCTTACAAGAAGTGTAGGAGTTGGGTGTTTGAGTATATGGAAGATCAAAGTTGGTCATCATCATCATCATCTAGCAAAGAGGAAGAACATAAAACCCTAGAGCTTTTCCCATTGCACCCGGAAGGCAGATGA 441 0.4399 MLYRGGMRTPNAQQIEQITTQLGKYGKIEGKNVFYWFQNHKARERQKQKRNSLGLSHTPRTPPTVATVVATATTTIVSSPTFAPSLSFETSRGEVIERDHEDSPYKKCRSWVFEYMEDQSWSSSSSSSKEEEHKTLELFPLHPEGR 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30214g00012 146 MobiDBLite consensus disorder prediction 83 104 - -
Stsc30214g00012 146 PANTHER WUSCHEL-RELATED HOMEOBOX 4 1 146 IPR044186 GO:0003700|GO:0010067|GO:0010087|GO:0051301
Stsc30214g00012 146 ProSiteProfiles 'Homeobox' domain profile. 1 47 IPR001356 GO:0003677
Stsc30214g00012 146 MobiDBLite consensus disorder prediction 117 146 - -
Stsc30214g00012 146 MobiDBLite consensus disorder prediction 45 65 - -
Stsc30214g00012 146 MobiDBLite consensus disorder prediction 127 146 - -
Stsc30214g00012 146 SUPERFAMILY Homeodomain-like 8 52 IPR009057 -
Stsc30214g00012 146 Pfam Homeodomain 3 46 IPR001356 GO:0003677
Stsc30214g00012 146 Gene3D - 5 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30214g00012 Stsc-Chr30214 81517 82836 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30214g00012 1 90 Wox Gene Family AT1G46480 58.889 6.40e-32 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Stsc30214g00012 Homeodomain 6.5e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30214g00012 - - aip:107605651 246.899