Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30214g00009 ATGCAACAAGAAGAGGAGCCACAGCAGAATGAGCCACCTCACTCTCACTCTCACTCTCGCTCCGTGACGCTACCTCCCGGTTGCCGGTTCCACCCTTCGGAGGAGCTTCTATTGCGTTACTACCTGAAGAACAAAAACGGCACCGGGAACGGGAACTGGAACGTTAACGGTGGTTTGGGATTCGACGGTTCTGATTTGATTCGGGAGCTGGATTTGTACGGTTACGATCCTTTTGAGTTGCCGGATTTTACTTGCTTTGCGTACGGTTCCGGTGGGAGGAGGAGGCACTGGTACTGTTTCACTACCGTTAGGGTTTCGAAGGGGGAGAGGTGGAAGAGGGAGAGGAAGGTTAAGAGTGGGTTCTGGTTGAAGAAGGGAAGGGTTTTGAACGTTAACGGTGGTGTGGGGAACGTGGTTTTGGGAACGAGGAGGAGGTTCGTTTTCTATTTGGGAAATTCGGTGAAGAACAGTGCTAAAACGGATTGGGTTTTGTATGAATACGCATTGGTTGATCATGTTATGGCCTCTTTTGTTCTTTGCCGGGTATTTAGTAAGCCTCGTTATAAGAATAGTGCCTCAGACATTGGCCTGAGTTGTTGCGCAGAAGAGAGTGGATCAGCAGTGCGCCACATTGGTATTCAGCACGATGAACATGTTAGATCGGATGCTGTTGACCCCAAAGTATGTGATGATGCCTCCATTGACAAAAACAATGAGATATGTCCTGGTGAAAATAGCGATATTCAAGTTAAGAATGCACATGATGTAGATACTTTGCAATGTTTGGCAGGTCCTCAGGGAAGTCAGCAGGAACAGCTTCCTTCACTTCCGTGCGGTAGTACTATGTTAATTGAAGCAATGTCATCTCAGCAACAATTACTTTCCATCATGGAGGAAGATTTCATAGAGCTGAATGATCTTACATGA 927 0.4703 MQQEEEPQQNEPPHSHSHSRSVTLPPGCRFHPSEELLLRYYLKNKNGTGNGNWNVNGGLGFDGSDLIRELDLYGYDPFELPDFTCFAYGSGGRRRHWYCFTTVRVSKGERWKRERKVKSGFWLKKGRVLNVNGGVGNVVLGTRRRFVFYLGNSVKNSAKTDWVLYEYALVDHVMASFVLCRVFSKPRYKNSASDIGLSCCAEESGSAVRHIGIQHDEHVRSDAVDPKVCDDASIDKNNEICPGENSDIQVKNAHDVDTLQCLAGPQGSQQEQLPSLPCGSTMLIEAMSSQQQLLSIMEEDFIELNDLT 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30214g00009 308 ProSiteProfiles NAC domain profile. 24 185 IPR003441 GO:0003677|GO:0006355
Stsc30214g00009 308 MobiDBLite consensus disorder prediction 1 26 - -
Stsc30214g00009 308 SUPERFAMILY NAC domain 19 185 IPR036093 GO:0003677|GO:0006355
Stsc30214g00009 308 MobiDBLite consensus disorder prediction 1 22 - -
Stsc30214g00009 308 Pfam No apical meristem (NAM) protein 25 169 IPR003441 GO:0003677|GO:0006355
Stsc30214g00009 308 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 24 217 - -
Stsc30214g00009 308 Gene3D NAC domain 33 189 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30214g00009 Stsc-Chr30214 66921 70692 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30214g00009 23 185 NAC Transcription Factor Family AT1G69490 32.759 4.61e-21 89.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Stsc30214g00009 NAM 7.2e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30214g00009 - - adu:107495754 448.358